Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CDK5RAP1Q96SZ6 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 IRF8-202ENST00000562492 946 ntTSL 3 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 AL121894.2-201ENST00000602977 491 ntBASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CDK5RAP1Q96SZ6 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 DDX43P3-201ENST00000441064 443 ntBASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 AC132008.2-207ENST00000454517 770 ntBASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 AL121912.1-201ENST00000603683 238 ntBASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 HR-201ENST00000312841 5351 ntTSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC18.54■□□□□ 0.56
CDK5RAP1Q96SZ6 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 AC009113.1-201ENST00000570267 2443 ntBASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 COX5BP2-201ENST00000392354 334 ntBASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 AC103564.2-201ENST00000432853 1299 ntBASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 AC106795.1-205ENST00000512851 1056 ntBASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 ABALON-201ENST00000629058 1903 ntBASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CDK5RAP1Q96SZ6 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CDK5RAP1Q96SZ6 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms