Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 AC231657.2-201ENST00000624556 255 ntBASIC16.88■□□□□ 0.29
NR1H4Q96RI1 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 TNIP1-202ENST00000389378 2935 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC16.88■□□□□ 0.29
NR1H4Q96RI1 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 AL136379.1-201ENST00000623471 2642 ntBASIC16.87■□□□□ 0.29
NR1H4Q96RI1 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 CYP2T3P-201ENST00000601990 817 ntBASIC16.87■□□□□ 0.29
NR1H4Q96RI1 MIR5787-201ENST00000611784 55 ntBASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 IFT140-203ENST00000426508 5270 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
NR1H4Q96RI1 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 DLGAP1-220ENST00000581699 2258 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 ME3-201ENST00000323418 1068 ntTSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 MAZ-216ENST00000616501 991 ntTSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.86■□□□□ 0.29
NR1H4Q96RI1 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 LYSMD4-203ENST00000378904 2122 ntBASIC16.85■□□□□ 0.29
NR1H4Q96RI1 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
NR1H4Q96RI1 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC16.85■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms