Protein–RNA interactions for Protein: Q96BP2

CHCHD1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD1Q96BP2 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 TCP10-201ENST00000366827 2250 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC13.05□□□□□ -0.32
CHCHD1Q96BP2 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 AC092068.3-201ENST00000587894 2016 ntBASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 BID-213ENST00000615414 2236 ntTSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC13.04□□□□□ -0.32
CHCHD1Q96BP2 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ADGRA1-AS1-201ENST00000366099 3236 ntBASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 PAK4-203ENST00000360442 2855 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 PBX2P1-201ENST00000493219 1291 ntBASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CHCHD1Q96BP2 RBPJ-205ENST00000355476 5990 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms