Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 AC233702.3-201ENST00000578656 1387 ntBASIC16.08■□□□□ 0.16
CPNE4Q96A23 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CPNE4Q96A23 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CPNE4Q96A23 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 AC104819.1-201ENST00000504587 486 ntBASIC16.07■□□□□ 0.16
CPNE4Q96A23 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC16.07■□□□□ 0.16
CPNE4Q96A23 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CPNE4Q96A23 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 FLJ13224-201ENST00000313737 1514 ntBASIC16.06■□□□□ 0.16
CPNE4Q96A23 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 KRT18P56-201ENST00000507275 550 ntBASIC16.06■□□□□ 0.16
CPNE4Q96A23 AP000867.3-201ENST00000524675 377 ntBASIC16.06■□□□□ 0.16
CPNE4Q96A23 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 MPI-205ENST00000562606 1052 ntTSL 3 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 MIR3652-201ENST00000579335 131 ntBASIC16.06■□□□□ 0.16
CPNE4Q96A23 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CPNE4Q96A23 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CPNE4Q96A23 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.05■□□□□ 0.16
CPNE4Q96A23 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CPNE4Q96A23 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms