Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 HMGA1P5-201ENST00000412453 271 ntBASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 AC010653.2-201ENST00000623505 997 ntBASIC15.77■□□□□ 0.12
RAB40AQ8WXH6 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 OR6D1P-203ENST00000641209 4860 ntBASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 LINC00602-201ENST00000629776 2065 ntBASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 PDE4A-201ENST00000293683 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC15.77■□□□□ 0.11
RAB40AQ8WXH6 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TNRC18P3-201ENST00000441896 2691 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 AL353719.1-201ENST00000566847 864 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 GPX4-207ENST00000589115 812 ntTSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 FAM87A-204ENST00000613235 858 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 AL023803.3-201ENST00000615559 522 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 AL109659.2-201ENST00000606809 1674 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 NKILA-202ENST00000614771 2598 ntBASIC15.76■□□□□ 0.11
RAB40AQ8WXH6 AMMECR1-201ENST00000262844 5504 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 INGX-201ENST00000359239 846 ntBASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC073343.2-202ENST00000430844 532 ntTSL 4 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.75■□□□□ 0.11
RAB40AQ8WXH6 AC007663.1-201ENST00000438948 1240 ntBASIC15.75■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 42.4 ms