Protein–RNA interactions for Protein: Q8WXE1

ATRIP, ATR-interacting protein, humanhuman

Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIPQ8WXE1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 CLEC4GP1-201ENST00000596555 870 ntBASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AP000692.2-201ENST00000608391 879 ntBASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AC130371.2-201ENST00000619443 611 ntBASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 TBC1D3P2-202ENST00000577902 1649 ntBASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
ATRIPQ8WXE1 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC084018.2-201ENST00000613093 2607 ntBASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 SLC25A1P2-201ENST00000430693 912 ntBASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC011558.1-201ENST00000623459 338 ntBASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 AC006116.8-202ENST00000587620 1550 ntBASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
ATRIPQ8WXE1 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 AC010653.2-201ENST00000623505 997 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 AC141257.4-201ENST00000634557 245 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 AC136944.6-201ENST00000634818 245 ntBASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
ATRIPQ8WXE1 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 AL512604.3-201ENST00000569583 964 ntBASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.72■□□□□ 0.75
ATRIPQ8WXE1 AC140113.3-201ENST00000605663 199 ntBASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms