Protein–RNA interactions for Protein: Q8WXD2

SCG3, Secretogranin-3, humanhuman

Known RBP Predictions only

Length 468 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCG3Q8WXD2 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.37■□□□□ 0.53
SCG3Q8WXD2 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 AC004080.2-201ENST00000523331 556 ntTSL 4 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SCG3Q8WXD2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC009102.3-201ENST00000623118 1491 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 SPDYE15P-201ENST00000424157 909 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 KRT18P23-201ENST00000435622 1283 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC104390.1-201ENST00000555663 520 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC083849.1-201ENST00000615227 514 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC112497.1-201ENST00000624824 639 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC135776.1-201ENST00000319817 2481 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 AC093677.2-201ENST00000600169 1863 ntBASIC18.35■□□□□ 0.53
SCG3Q8WXD2 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.35■□□□□ 0.53
SCG3Q8WXD2 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 LINC00896-202ENST00000609602 2128 ntBASIC18.34■□□□□ 0.53
SCG3Q8WXD2 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 SLC25A6P5-201ENST00000435663 894 ntBASIC18.34■□□□□ 0.53
SCG3Q8WXD2 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 HYMAI.1-201ENST00000620949 238 ntBASIC18.34■□□□□ 0.53
SCG3Q8WXD2 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC18.34■□□□□ 0.53
SCG3Q8WXD2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms