Protein–RNA interactions for Protein: Q8TAP4

LMO3, LIM domain only protein 3, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3Q8TAP4 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 SIRPAP1-201ENST00000448467 1770 ntBASIC19.16■□□□□ 0.66
LMO3Q8TAP4 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 BOC-212ENST00000485230 2173 ntTSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ELOA3-201ENST00000330682 1877 ntAPPRIS P1 BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
LMO3Q8TAP4 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 AC005336.2-201ENST00000593183 939 ntBASIC19.15■□□□□ 0.66
LMO3Q8TAP4 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 AC124864.1-201ENST00000623408 392 ntBASIC19.15■□□□□ 0.66
LMO3Q8TAP4 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 AC141586.5-201ENST00000624546 2050 ntBASIC19.15■□□□□ 0.66
LMO3Q8TAP4 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
LMO3Q8TAP4 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMO3Q8TAP4 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMO3Q8TAP4 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC19.14■□□□□ 0.66
LMO3Q8TAP4 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC19.14■□□□□ 0.66
LMO3Q8TAP4 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.66
LMO3Q8TAP4 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 AC005104.2-201ENST00000427818 678 ntBASIC19.14■□□□□ 0.65
LMO3Q8TAP4 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 AC090616.6-201ENST00000582640 721 ntBASIC19.14■□□□□ 0.65
LMO3Q8TAP4 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
LMO3Q8TAP4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 PCED1CP-201ENST00000419887 785 ntBASIC19.13■□□□□ 0.65
LMO3Q8TAP4 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 AC091607.1-201ENST00000490318 1060 ntBASIC19.13■□□□□ 0.65
LMO3Q8TAP4 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 AC125634.1-201ENST00000438758 1403 ntBASIC19.13■□□□□ 0.65
LMO3Q8TAP4 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 AL138688.1-201ENST00000624851 1594 ntBASIC19.13■□□□□ 0.65
LMO3Q8TAP4 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LMO3Q8TAP4 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms