Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 TCAP-202ENST00000578283 583 ntTSL 5 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 AL589935.2-201ENST00000616471 1231 ntBASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.86■□□□□ 0.29
SNIP1Q8TAD8 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 AC087289.5-201ENST00000586076 3175 ntBASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SNIP1Q8TAD8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 BX005266.1-201ENST00000473402 457 ntBASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 SDCCAG3P1-201ENST00000589292 1150 ntBASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 AC244517.3-201ENST00000616254 1235 ntBASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 AC073592.4-201ENST00000623827 446 ntBASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.84■□□□□ 0.29
SNIP1Q8TAD8 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SNIP1Q8TAD8 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SNIP1Q8TAD8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 SPCS2P1-201ENST00000561636 679 ntBASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
SNIP1Q8TAD8 AC106028.4-201ENST00000614509 607 ntBASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 27.5 ms