Protein–RNA interactions for Protein: Q8NFY4

SEMA6D, Semaphorin-6D, humanhuman

Predictions only

Length 1,073 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6DQ8NFY4 AC139887.4-201ENST00000607877 719 ntBASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 AP000550.4-202ENST00000639755 178 ntBASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
SEMA6DQ8NFY4 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 COL4A2-201ENST00000360467 6281 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 REEP1-209ENST00000541910 969 ntTSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 NT5C-210ENST00000582160 860 ntTSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 AC008687.5-201ENST00000593746 558 ntBASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 HLA-DQB1-201ENST00000374943 1656 ntBASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEMA6DQ8NFY4 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 YBX1P2-201ENST00000489612 999 ntBASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 AC099398.1-201ENST00000567919 2776 ntBASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SEMA6DQ8NFY4 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms