Protein–RNA interactions for Protein: Q8NFU1

BEST2, Bestrophin-2, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST2Q8NFU1 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 AC096633.1-201ENST00000422446 749 ntBASIC19.23■□□□□ 0.67
BEST2Q8NFU1 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 AC116407.2-201ENST00000613639 860 ntBASIC19.23■□□□□ 0.67
BEST2Q8NFU1 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 FLJ13224-201ENST00000313737 1514 ntBASIC19.23■□□□□ 0.67
BEST2Q8NFU1 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
BEST2Q8NFU1 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 STK4-201ENST00000372801 2038 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 INTS4P1-201ENST00000438455 1935 ntBASIC19.22■□□□□ 0.67
BEST2Q8NFU1 AL020996.1-203ENST00000536896 2307 ntBASIC19.22■□□□□ 0.67
BEST2Q8NFU1 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 FGF11-204ENST00000575235 928 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
BEST2Q8NFU1 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AP000997.3-201ENST00000623333 2250 ntBASIC19.21■□□□□ 0.67
BEST2Q8NFU1 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 FAM220CP-201ENST00000395253 831 ntBASIC19.21■□□□□ 0.67
BEST2Q8NFU1 LSM5-204ENST00000409909 740 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AC007967.3-201ENST00000434308 558 ntBASIC19.21■□□□□ 0.67
BEST2Q8NFU1 TPRA1-204ENST00000450633 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 BMF-207ENST00000559701 630 ntTSL 3 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 AL031008.1-201ENST00000619963 541 ntBASIC19.21■□□□□ 0.67
BEST2Q8NFU1 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
BEST2Q8NFU1 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms