Protein–RNA interactions for Protein: Q8NEE8

TTC16, Tetratricopeptide repeat protein 16, humanhuman

Predictions only

Length 873 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC16Q8NEE8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 DDT-206ENST00000430101 573 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 AL160237.2-201ENST00000556165 472 ntBASIC18.8■□□□□ 0.6
TTC16Q8NEE8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 AL591684.3-201ENST00000605187 298 ntBASIC18.8■□□□□ 0.6
TTC16Q8NEE8 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.8■□□□□ 0.6
TTC16Q8NEE8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
TTC16Q8NEE8 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AL020996.1-203ENST00000536896 2307 ntBASIC18.78■□□□□ 0.6
TTC16Q8NEE8 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AKR1C7P-201ENST00000305623 895 ntBASIC18.78■□□□□ 0.6
TTC16Q8NEE8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AP000347.1-202ENST00000435868 847 ntBASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 BNIP3P18-201ENST00000593976 575 ntBASIC18.78■□□□□ 0.6
TTC16Q8NEE8 AL121912.1-201ENST00000603683 238 ntBASIC18.78■□□□□ 0.6
TTC16Q8NEE8 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TTC16Q8NEE8 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 MRPL3P1-201ENST00000400109 1033 ntBASIC18.77■□□□□ 0.6
TTC16Q8NEE8 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TTC16Q8NEE8 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms