Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AF238378.1-201ENST00000526806 358 ntBASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AP001005.1-201ENST00000571755 1248 ntBASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 AC008764.6-201ENST00000595909 2069 ntBASIC20.28■□□□□ 0.84
RETREG2Q8NC44 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RETREG2Q8NC44 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 SNCG-201ENST00000348795 684 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 MOK-208ENST00000519058 917 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
RETREG2Q8NC44 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
RETREG2Q8NC44 AC135776.1-201ENST00000319817 2481 ntBASIC20.27■□□□□ 0.83
RETREG2Q8NC44 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 HES2-202ENST00000377836 507 ntTSL 2 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 TSPY12P-201ENST00000421279 868 ntBASIC20.26■□□□□ 0.83
RETREG2Q8NC44 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 CDV3-207ENST00000508481 661 ntTSL 3 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 AP005901.3-202ENST00000581653 237 ntBASIC20.26■□□□□ 0.83
RETREG2Q8NC44 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
RETREG2Q8NC44 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AC093677.2-201ENST00000600169 1863 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 SLC25A6P5-201ENST00000435663 894 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 FAM197Y8-203ENST00000450145 560 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AL591684.3-201ENST00000605187 298 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AF228730.7-201ENST00000641842 219 ntBASIC20.25■□□□□ 0.83
RETREG2Q8NC44 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
RETREG2Q8NC44 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms