Protein–RNA interactions for Protein: Q8N7R7

CCNYL1, Cyclin-Y-like protein 1, humanhuman

Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNYL1Q8N7R7 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 MIR1238-201ENST00000408483 83 ntBASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 FITM1-202ENST00000559294 800 ntBASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CCNYL1Q8N7R7 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 TLE4-206ENST00000376552 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 AC132938.6-201ENST00000623828 1655 ntBASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 C2orf69P3-201ENST00000565542 1120 ntBASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CCNYL1Q8N7R7 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 TDRD7-201ENST00000355295 3834 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 YKT6-201ENST00000223369 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 MIR4785-201ENST00000585005 73 ntBASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 AL023806.1-201ENST00000603994 1649 ntBASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 ZNF256-202ENST00000598928 1958 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CCNYL1Q8N7R7 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 HRAT92-201ENST00000452622 3506 ntTSL 2 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 TSC2-201ENST00000219476 6156 ntAPPRIS P3 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CCNYL1Q8N7R7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms