Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 NEK4P2-201ENST00000580004 1012 ntBASIC17.79■□□□□ 0.44
APLFQ8IW19 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.79■□□□□ 0.44
APLFQ8IW19 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 AC103702.1-201ENST00000548801 2630 ntBASIC17.79■□□□□ 0.44
APLFQ8IW19 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
APLFQ8IW19 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
APLFQ8IW19 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.79■□□□□ 0.44
APLFQ8IW19 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
APLFQ8IW19 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 ADRB1-201ENST00000369295 2853 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
APLFQ8IW19 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 ANO7L1-203ENST00000602586 1720 ntBASIC17.78■□□□□ 0.44
APLFQ8IW19 CERCAM-201ENST00000372838 2685 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC17.78■□□□□ 0.44
APLFQ8IW19 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
APLFQ8IW19 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC17.78■□□□□ 0.44
APLFQ8IW19 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC17.78■□□□□ 0.44
APLFQ8IW19 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC17.78■□□□□ 0.44
APLFQ8IW19 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC17.78■□□□□ 0.44
APLFQ8IW19 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
APLFQ8IW19 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.78■□□□□ 0.44
APLFQ8IW19 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.78■□□□□ 0.44
APLFQ8IW19 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.44
APLFQ8IW19 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.77■□□□□ 0.44
APLFQ8IW19 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
APLFQ8IW19 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.77■□□□□ 0.44
APLFQ8IW19 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC17.77■□□□□ 0.44
APLFQ8IW19 AL136038.3-201ENST00000561909 1096 ntBASIC17.77■□□□□ 0.44
APLFQ8IW19 WDR88-203ENST00000592765 651 ntTSL 5 BASIC17.77■□□□□ 0.44
APLFQ8IW19 KRT8P45-201ENST00000414328 1447 ntBASIC17.77■□□□□ 0.44
APLFQ8IW19 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
APLFQ8IW19 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC17.77■□□□□ 0.43
APLFQ8IW19 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC17.77■□□□□ 0.43
APLFQ8IW19 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.77■□□□□ 0.43
APLFQ8IW19 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
APLFQ8IW19 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
APLFQ8IW19 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.76■□□□□ 0.43
APLFQ8IW19 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC17.76■□□□□ 0.43
APLFQ8IW19 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
APLFQ8IW19 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
APLFQ8IW19 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC17.76■□□□□ 0.43
APLFQ8IW19 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.76■□□□□ 0.43
APLFQ8IW19 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
APLFQ8IW19 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.76■□□□□ 0.43
APLFQ8IW19 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms