Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
CDKL3Q8IVW4 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC073508.3-201ENST00000619697 1419 ntBASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC005521.1-201ENST00000393351 872 ntBASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC117947.1-201ENST00000427448 529 ntBASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 P4HB-223ENST00000576390 439 ntTSL 4 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
CDKL3Q8IVW4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 TK2-213ENST00000563369 882 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 AC004263.2-201ENST00000617183 678 ntBASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
CDKL3Q8IVW4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.54
CDKL3Q8IVW4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 AC009154.2-201ENST00000621177 724 ntBASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 AL355312.1-201ENST00000407115 2176 ntBASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC18.39■□□□□ 0.53
CDKL3Q8IVW4 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms