Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 AL357033.4-201ENST00000617703 1807 ntBASIC18.97■□□□□ 0.63
RNF135Q8IUD6 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
RNF135Q8IUD6 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 AC004832.2-201ENST00000426397 482 ntBASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 NAT14-202ENST00000587400 416 ntTSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 GZMM-202ENST00000592501 941 ntTSL 3 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 NEFHP1-201ENST00000412845 2629 ntBASIC18.96■□□□□ 0.63
RNF135Q8IUD6 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 TP73-AS1-210ENST00000637775 1455 ntBASIC18.96■□□□□ 0.63
RNF135Q8IUD6 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 AC034236.2-201ENST00000606662 1610 ntBASIC18.96■□□□□ 0.63
RNF135Q8IUD6 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
RNF135Q8IUD6 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.95■□□□□ 0.62
RNF135Q8IUD6 RNA5SP416-201ENST00000516838 111 ntBASIC18.95■□□□□ 0.62
RNF135Q8IUD6 AC012640.2-201ENST00000561606 901 ntBASIC18.95■□□□□ 0.62
RNF135Q8IUD6 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.95■□□□□ 0.62
RNF135Q8IUD6 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RNF135Q8IUD6 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 AC211486.1-202ENST00000416371 468 ntBASIC18.94■□□□□ 0.62
RNF135Q8IUD6 METTL21AP1-201ENST00000438852 635 ntBASIC18.94■□□□□ 0.62
RNF135Q8IUD6 CYMP-203ENST00000474680 1263 ntBASIC18.94■□□□□ 0.62
RNF135Q8IUD6 AC211476.1-201ENST00000503899 468 ntBASIC18.94■□□□□ 0.62
RNF135Q8IUD6 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
RNF135Q8IUD6 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
RNF135Q8IUD6 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF135Q8IUD6 AL499627.1-201ENST00000569373 2188 ntBASIC18.93■□□□□ 0.62
RNF135Q8IUD6 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF135Q8IUD6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF135Q8IUD6 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF135Q8IUD6 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms