Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC16.33■□□□□ 0.21
NIPAL3Q6P499 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC108860.2-201ENST00000562760 2183 ntBASIC16.33■□□□□ 0.2
NIPAL3Q6P499 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 RNF152P1-201ENST00000397754 604 ntBASIC16.33■□□□□ 0.2
NIPAL3Q6P499 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC104076.2-201ENST00000448912 469 ntBASIC16.33■□□□□ 0.2
NIPAL3Q6P499 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 RBM42-202ENST00000586618 771 ntTSL 3 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC012313.1-201ENST00000593393 3059 ntBASIC16.33■□□□□ 0.2
NIPAL3Q6P499 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.33■□□□□ 0.2
NIPAL3Q6P499 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 TSPY5P-201ENST00000426936 936 ntBASIC16.32■□□□□ 0.2
NIPAL3Q6P499 AC092647.4-201ENST00000457211 535 ntBASIC16.32■□□□□ 0.2
NIPAL3Q6P499 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.32■□□□□ 0.2
NIPAL3Q6P499 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC16.31■□□□□ 0.2
NIPAL3Q6P499 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 RASA4DP-201ENST00000460726 1199 ntBASIC16.31■□□□□ 0.2
NIPAL3Q6P499 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 AC009053.2-201ENST00000563701 2365 ntBASIC16.31■□□□□ 0.2
NIPAL3Q6P499 OR6D1P-202ENST00000641007 5290 ntBASIC16.31■□□□□ 0.2
NIPAL3Q6P499 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
NIPAL3Q6P499 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
NIPAL3Q6P499 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms