Protein–RNA interactions for Protein: Q4VC31

CCDC58, Coiled-coil domain-containing protein 58, humanhuman

Predictions only

Length 144 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58Q4VC31 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 AL023806.1-201ENST00000603994 1649 ntBASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 FSCN1P1-201ENST00000568912 1481 ntBASIC16.05■□□□□ 0.16
CCDC58Q4VC31 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 AC096733.2-201ENST00000609937 1394 ntBASIC16.05■□□□□ 0.16
CCDC58Q4VC31 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 MIR3180-5-201ENST00000583743 153 ntBASIC16.05■□□□□ 0.16
CCDC58Q4VC31 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 AC073195.1-201ENST00000607241 877 ntBASIC16.05■□□□□ 0.16
CCDC58Q4VC31 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.05■□□□□ 0.16
CCDC58Q4VC31 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 UROS-202ENST00000368778 1556 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 KRT8P7-201ENST00000533003 1432 ntBASIC16.04■□□□□ 0.16
CCDC58Q4VC31 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 KLF13-207ENST00000560473 489 ntTSL 3 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CCDC58Q4VC31 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 PCDHA1-201ENST00000378133 2726 ntBASIC16.03■□□□□ 0.16
CCDC58Q4VC31 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 HOXB1-202ENST00000577092 1414 ntBASIC16.03■□□□□ 0.16
CCDC58Q4VC31 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 ZNF84-208ENST00000539354 3237 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.03■□□□□ 0.16
CCDC58Q4VC31 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC16.03■□□□□ 0.16
CCDC58Q4VC31 CA15P1-201ENST00000481698 905 ntBASIC16.03■□□□□ 0.16
CCDC58Q4VC31 AF186192.3-201ENST00000583427 947 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms