Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 AC025062.2-201ENST00000605477 670 ntBASIC20.8■□□□□ 0.92
IRX3P78415 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC20.8■□□□□ 0.92
IRX3P78415 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.8■□□□□ 0.92
IRX3P78415 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.8■□□□□ 0.92
IRX3P78415 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
IRX3P78415 AC005332.7-201ENST00000614046 2005 ntBASIC20.8■□□□□ 0.92
IRX3P78415 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
IRX3P78415 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC20.79■□□□□ 0.92
IRX3P78415 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC20.79■□□□□ 0.92
IRX3P78415 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 CTNS-203ENST00000399306 803 ntTSL 3 BASIC20.79■□□□□ 0.92
IRX3P78415 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.79■□□□□ 0.92
IRX3P78415 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC20.79■□□□□ 0.92
IRX3P78415 AC140113.2-201ENST00000604370 208 ntBASIC20.79■□□□□ 0.92
IRX3P78415 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
IRX3P78415 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC20.79■□□□□ 0.92
IRX3P78415 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
IRX3P78415 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.79■□□□□ 0.92
IRX3P78415 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC20.78■□□□□ 0.92
IRX3P78415 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX3P78415 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 MID1IP1-202ENST00000378474 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 SOD2-201ENST00000337404 991 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX3P78415 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
IRX3P78415 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX3P78415 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 AC092183.1-201ENST00000469884 875 ntBASIC20.78■□□□□ 0.92
IRX3P78415 PGAM5P1-201ENST00000518923 814 ntBASIC20.78■□□□□ 0.92
IRX3P78415 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC20.78■□□□□ 0.92
IRX3P78415 AC012640.2-201ENST00000561606 901 ntBASIC20.78■□□□□ 0.92
IRX3P78415 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.78■□□□□ 0.92
IRX3P78415 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX3P78415 AL356488.2-201ENST00000602755 427 ntBASIC20.78■□□□□ 0.92
IRX3P78415 FAM197Y3-203ENST00000618346 717 ntBASIC20.78■□□□□ 0.92
IRX3P78415 AC008735.5-201ENST00000623544 497 ntBASIC20.78■□□□□ 0.92
IRX3P78415 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.78■□□□□ 0.92
IRX3P78415 NEFHP1-201ENST00000412845 2629 ntBASIC20.78■□□□□ 0.92
IRX3P78415 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC20.78■□□□□ 0.92
IRX3P78415 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
IRX3P78415 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 PTGES2-AS1-201ENST00000443493 2100 ntBASIC20.77■□□□□ 0.92
IRX3P78415 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC20.77■□□□□ 0.92
IRX3P78415 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 AL591424.1-201ENST00000442569 1213 ntBASIC20.77■□□□□ 0.92
IRX3P78415 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.77■□□□□ 0.92
IRX3P78415 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 Z83851.2-201ENST00000609564 659 ntBASIC20.77■□□□□ 0.92
IRX3P78415 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
IRX3P78415 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.77■□□□□ 0.92
IRX3P78415 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
IRX3P78415 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
IRX3P78415 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.91
IRX3P78415 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC20.77■□□□□ 0.91
IRX3P78415 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.77■□□□□ 0.91
IRX3P78415 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC20.77■□□□□ 0.91
IRX3P78415 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
IRX3P78415 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
IRX3P78415 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
IRX3P78415 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms