Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERVK_113P62684 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC20.72■□□□□ 0.91
HERVK_113P62684 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
HERVK_113P62684 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC20.72■□□□□ 0.91
HERVK_113P62684 AC005104.2-201ENST00000427818 678 ntBASIC20.72■□□□□ 0.91
HERVK_113P62684 AC234772.2-201ENST00000456532 375 ntTSL 3 BASIC20.72■□□□□ 0.91
HERVK_113P62684 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC20.72■□□□□ 0.91
HERVK_113P62684 RNA5SP415-201ENST00000517246 115 ntBASIC20.72■□□□□ 0.91
HERVK_113P62684 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
HERVK_113P62684 Z83851.2-201ENST00000609564 659 ntBASIC20.72■□□□□ 0.91
HERVK_113P62684 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC20.72■□□□□ 0.91
HERVK_113P62684 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC20.72■□□□□ 0.91
HERVK_113P62684 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
HERVK_113P62684 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
HERVK_113P62684 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC20.72■□□□□ 0.91
HERVK_113P62684 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC20.71■□□□□ 0.91
HERVK_113P62684 SEH1L-202ENST00000399892 1846 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
HERVK_113P62684 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC20.71■□□□□ 0.91
HERVK_113P62684 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 VSTM1-201ENST00000338372 1023 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC20.71■□□□□ 0.91
HERVK_113P62684 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC20.71■□□□□ 0.91
HERVK_113P62684 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.71■□□□□ 0.91
HERVK_113P62684 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC20.71■□□□□ 0.91
HERVK_113P62684 MTDHP4-201ENST00000600287 670 ntBASIC20.71■□□□□ 0.91
HERVK_113P62684 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC20.71■□□□□ 0.91
HERVK_113P62684 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC20.71■□□□□ 0.91
HERVK_113P62684 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
HERVK_113P62684 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC20.71■□□□□ 0.91
HERVK_113P62684 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.91
HERVK_113P62684 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 AC135050.7-201ENST00000624508 2218 ntBASIC20.7■□□□□ 0.9
HERVK_113P62684 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC20.7■□□□□ 0.9
HERVK_113P62684 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC20.7■□□□□ 0.9
HERVK_113P62684 INIP-202ENST00000374236 874 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 AL591424.1-201ENST00000442569 1213 ntBASIC20.7■□□□□ 0.9
HERVK_113P62684 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC20.7■□□□□ 0.9
HERVK_113P62684 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 AP000867.4-201ENST00000641616 219 ntBASIC20.7■□□□□ 0.9
HERVK_113P62684 AC107918.4-202ENST00000641623 219 ntBASIC20.7■□□□□ 0.9
HERVK_113P62684 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 AC011416.4-201ENST00000639283 2195 ntTSL 5 BASIC20.7■□□□□ 0.9
HERVK_113P62684 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
HERVK_113P62684 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC20.7■□□□□ 0.9
HERVK_113P62684 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 COMP-202ENST00000425807 2292 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.7■□□□□ 0.9
HERVK_113P62684 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC20.69■□□□□ 0.9
HERVK_113P62684 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC20.69■□□□□ 0.9
HERVK_113P62684 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.69■□□□□ 0.9
HERVK_113P62684 SRP19-202ENST00000445150 833 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 NMU-202ENST00000505262 693 ntTSL 3 BASIC20.69■□□□□ 0.9
HERVK_113P62684 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC20.69■□□□□ 0.9
HERVK_113P62684 AC105339.3-201ENST00000560043 636 ntBASIC20.69■□□□□ 0.9
HERVK_113P62684 DCTPP1-204ENST00000568434 853 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
HERVK_113P62684 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC20.69■□□□□ 0.9
HERVK_113P62684 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.69■□□□□ 0.9
HERVK_113P62684 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 AC090164.3-201ENST00000610780 2143 ntBASIC20.69■□□□□ 0.9
HERVK_113P62684 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
HERVK_113P62684 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
HERVK_113P62684 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 AL390961.4-201ENST00000623958 2535 ntBASIC20.68■□□□□ 0.9
HERVK_113P62684 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC20.68■□□□□ 0.9
HERVK_113P62684 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms