Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 OR6D1P-203ENST00000641209 4860 ntBASIC15.71■□□□□ 0.11
SEC61A1P61619 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
SEC61A1P61619 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 SNAI3-AS1-205ENST00000568633 2096 ntBASIC15.71■□□□□ 0.11
SEC61A1P61619 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC15.71■□□□□ 0.11
SEC61A1P61619 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC15.71■□□□□ 0.11
SEC61A1P61619 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC15.71■□□□□ 0.11
SEC61A1P61619 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC15.71■□□□□ 0.11
SEC61A1P61619 YBX1P2-201ENST00000489612 999 ntBASIC15.71■□□□□ 0.11
SEC61A1P61619 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC15.71■□□□□ 0.11
SEC61A1P61619 NME3-204ENST00000563498 920 ntTSL 2 BASIC15.71■□□□□ 0.11
SEC61A1P61619 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 AL590326.2-201ENST00000625139 305 ntBASIC15.71■□□□□ 0.11
SEC61A1P61619 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC15.71■□□□□ 0.11
SEC61A1P61619 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.71■□□□□ 0.11
SEC61A1P61619 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
SEC61A1P61619 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
SEC61A1P61619 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
SEC61A1P61619 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC15.71■□□□□ 0.1
SEC61A1P61619 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
SEC61A1P61619 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC15.71■□□□□ 0.1
SEC61A1P61619 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
SEC61A1P61619 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 CYP2W1-202ENST00000340150 2361 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 ARMC10P1-201ENST00000313754 855 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 Telomerase-vert.1-201ENST00000363312 438 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 COX11P1-201ENST00000489116 835 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
SEC61A1P61619 NTF6B-201ENST00000591913 560 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 AL023973.1-201ENST00000624619 620 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
SEC61A1P61619 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC15.7■□□□□ 0.1
SEC61A1P61619 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC15.7■□□□□ 0.1
SEC61A1P61619 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
SEC61A1P61619 GPAT2P1-201ENST00000444924 1672 ntBASIC15.7■□□□□ 0.1
SEC61A1P61619 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC15.69■□□□□ 0.1
SEC61A1P61619 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC15.69■□□□□ 0.1
SEC61A1P61619 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.69■□□□□ 0.1
SEC61A1P61619 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SEC61A1P61619 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms