Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC120498.8-201ENST00000614275 531 ntBASIC12.59□□□□□ -0.39
CKS1BP61024 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC12.59□□□□□ -0.39
CKS1BP61024 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 LINC00896-202ENST00000609602 2128 ntBASIC12.59□□□□□ -0.39
CKS1BP61024 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
CKS1BP61024 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC12.59□□□□□ -0.39
CKS1BP61024 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
CKS1BP61024 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC12.59□□□□□ -0.39
CKS1BP61024 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
CKS1BP61024 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC12.58□□□□□ -0.39
CKS1BP61024 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CKS1BP61024 MPPE1-211ENST00000588072 4236 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CKS1BP61024 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
CKS1BP61024 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC12.58□□□□□ -0.4
CKS1BP61024 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC12.58□□□□□ -0.4
CKS1BP61024 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC12.58□□□□□ -0.4
CKS1BP61024 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
CKS1BP61024 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC12.58□□□□□ -0.4
CKS1BP61024 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 RHEB-204ENST00000472642 900 ntTSL 3 BASIC12.58□□□□□ -0.4
CKS1BP61024 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC12.58□□□□□ -0.4
CKS1BP61024 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 PNMA6B-201ENST00000538162 1200 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
CKS1BP61024 AC060766.5-201ENST00000590539 871 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC12.58□□□□□ -0.4
CKS1BP61024 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 AL050303.2-201ENST00000619798 666 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 AC104581.4-201ENST00000623126 3052 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 MYC-208ENST00000641036 567 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 ATP11B-201ENST00000323116 7325 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC12.58□□□□□ -0.4
CKS1BP61024 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 SIN3B-202ENST00000379803 5129 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 AC073592.3-201ENST00000625118 1834 ntBASIC12.58□□□□□ -0.4
CKS1BP61024 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CKS1BP61024 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 NFIC-206ENST00000589123 8068 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC12.57□□□□□ -0.4
CKS1BP61024 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CKS1BP61024 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC12.57□□□□□ -0.4
CKS1BP61024 METTL15-202ENST00000403099 795 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms