Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.73■□□□□ 0.75
PEX3P56589 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
PEX3P56589 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
PEX3P56589 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
PEX3P56589 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC19.72■□□□□ 0.75
PEX3P56589 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 BCL2-203ENST00000589955 5011 ntBASIC19.72■□□□□ 0.75
PEX3P56589 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.72■□□□□ 0.75
PEX3P56589 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
PEX3P56589 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.72■□□□□ 0.75
PEX3P56589 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC19.72■□□□□ 0.75
PEX3P56589 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC19.72■□□□□ 0.75
PEX3P56589 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 AC099336.1-202ENST00000602961 463 ntBASIC19.72■□□□□ 0.75
PEX3P56589 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PEX3P56589 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC19.72■□□□□ 0.75
PEX3P56589 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PEX3P56589 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 AC125634.1-201ENST00000438758 1403 ntBASIC19.71■□□□□ 0.75
PEX3P56589 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PEX3P56589 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PEX3P56589 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX3P56589 SKP2-204ENST00000508514 821 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX3P56589 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC19.71■□□□□ 0.75
PEX3P56589 PRELID1P1-202ENST00000567272 903 ntBASIC19.71■□□□□ 0.75
PEX3P56589 MNT-208ENST00000575394 606 ntTSL 4 BASIC19.71■□□□□ 0.75
PEX3P56589 PRR29-207ENST00000580752 458 ntTSL 3 BASIC19.71■□□□□ 0.75
PEX3P56589 AL138831.2-201ENST00000606564 490 ntBASIC19.71■□□□□ 0.75
PEX3P56589 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
PEX3P56589 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PEX3P56589 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PEX3P56589 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
PEX3P56589 KRT18P55-202ENST00000578578 1546 ntBASIC19.71■□□□□ 0.75
PEX3P56589 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 IPPK-202ENST00000375522 882 ntTSL 3 BASIC19.7■□□□□ 0.74
PEX3P56589 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX3P56589 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC19.7■□□□□ 0.74
PEX3P56589 FOSL1P1-201ENST00000511041 816 ntBASIC19.7■□□□□ 0.74
PEX3P56589 AC138894.3-201ENST00000603787 634 ntBASIC19.7■□□□□ 0.74
PEX3P56589 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.7■□□□□ 0.74
PEX3P56589 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PEX3P56589 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PEX3P56589 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms