Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXG1P55316 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
FOXG1P55316 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
FOXG1P55316 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 RCN1P2-201ENST00000398357 915 ntBASIC15.69■□□□□ 0.1
FOXG1P55316 TSPY19P-201ENST00000418461 509 ntBASIC15.69■□□□□ 0.1
FOXG1P55316 TSPY18P-201ENST00000441642 509 ntBASIC15.69■□□□□ 0.1
FOXG1P55316 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXG1P55316 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC15.69■□□□□ 0.1
FOXG1P55316 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXG1P55316 AC096582.2-201ENST00000510860 516 ntBASIC15.69■□□□□ 0.1
FOXG1P55316 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC15.69■□□□□ 0.1
FOXG1P55316 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC15.69■□□□□ 0.1
FOXG1P55316 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
FOXG1P55316 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
FOXG1P55316 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
FOXG1P55316 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 AC009949.1-201ENST00000623048 1830 ntBASIC15.68■□□□□ 0.1
FOXG1P55316 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 AC010460.3-201ENST00000511359 1579 ntBASIC15.68■□□□□ 0.1
FOXG1P55316 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 TP73-AS1-210ENST00000637775 1455 ntBASIC15.68■□□□□ 0.1
FOXG1P55316 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXG1P55316 KRT18P31-201ENST00000506277 1292 ntBASIC15.68■□□□□ 0.1
FOXG1P55316 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC15.68■□□□□ 0.1
FOXG1P55316 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC15.68■□□□□ 0.1
FOXG1P55316 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 FICD-205ENST00000552758 603 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 AL121894.2-201ENST00000602977 491 ntBASIC15.68■□□□□ 0.1
FOXG1P55316 IRF5-214ENST00000613821 595 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC15.68■□□□□ 0.1
FOXG1P55316 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC15.68■□□□□ 0.1
FOXG1P55316 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
FOXG1P55316 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXG1P55316 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXG1P55316 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXG1P55316 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXG1P55316 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
FOXG1P55316 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
FOXG1P55316 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC15.67■□□□□ 0.1
FOXG1P55316 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC15.67■□□□□ 0.1
FOXG1P55316 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms