Protein–RNA interactions for Protein: P54727

RAD23B, UV excision repair protein RAD23 homolog B, humanhuman

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD23BP54727 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 AC100803.2-201ENST00000562459 1963 ntBASIC19.15■□□□□ 0.66
RAD23BP54727 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC19.15■□□□□ 0.66
RAD23BP54727 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
RAD23BP54727 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RAD23BP54727 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
RAD23BP54727 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAD23BP54727 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
RAD23BP54727 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.66
RAD23BP54727 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.66
RAD23BP54727 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
RAD23BP54727 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.14■□□□□ 0.65
RAD23BP54727 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.14■□□□□ 0.65
RAD23BP54727 AP002383.4-201ENST00000442518 975 ntBASIC19.14■□□□□ 0.65
RAD23BP54727 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.14■□□□□ 0.65
RAD23BP54727 MTCL1P1-201ENST00000446207 792 ntBASIC19.14■□□□□ 0.65
RAD23BP54727 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 GUSBP12-201ENST00000513727 720 ntBASIC19.14■□□□□ 0.65
RAD23BP54727 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
RAD23BP54727 AC124864.1-201ENST00000623408 392 ntBASIC19.14■□□□□ 0.65
RAD23BP54727 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.14■□□□□ 0.65
RAD23BP54727 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.14■□□□□ 0.65
RAD23BP54727 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
RAD23BP54727 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
RAD23BP54727 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 PRRT2-216ENST00000637403 2033 ntTSL 5 BASIC19.13■□□□□ 0.65
RAD23BP54727 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC19.13■□□□□ 0.65
RAD23BP54727 AL845331.1-201ENST00000424978 1190 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.13■□□□□ 0.65
RAD23BP54727 AC112698.1-201ENST00000510299 916 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RAD23BP54727 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 AC069148.1-201ENST00000608741 768 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 IGHV3-41-201ENST00000613121 348 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 AC022898.2-201ENST00000616822 1312 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 KRT18P55-202ENST00000578578 1546 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.13■□□□□ 0.65
RAD23BP54727 MFGE8-202ENST00000268151 1752 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
RAD23BP54727 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
RAD23BP54727 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
RAD23BP54727 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.12■□□□□ 0.65
RAD23BP54727 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC19.12■□□□□ 0.65
RAD23BP54727 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
RAD23BP54727 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 KRT8P47-201ENST00000604727 1398 ntBASIC19.12■□□□□ 0.65
RAD23BP54727 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAD23BP54727 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC19.12■□□□□ 0.65
RAD23BP54727 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC19.12■□□□□ 0.65
RAD23BP54727 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAD23BP54727 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.12■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 27.7 ms