Protein–RNA interactions for Protein: P54284

CACNB3, Voltage-dependent L-type calcium channel subunit beta-3, humanhuman

Predictions only

Length 484 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3P54284 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC21.13■□□□□ 0.97
CACNB3P54284 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC21.13■□□□□ 0.97
CACNB3P54284 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC21.13■□□□□ 0.97
CACNB3P54284 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 RNA5SP416-201ENST00000516838 111 ntBASIC21.13■□□□□ 0.97
CACNB3P54284 DHDH-204ENST00000523250 634 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 AC106782.2-201ENST00000563252 992 ntTSL 3 BASIC21.13■□□□□ 0.97
CACNB3P54284 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC21.13■□□□□ 0.97
CACNB3P54284 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 AC148477.5-201ENST00000625164 1645 ntBASIC21.13■□□□□ 0.97
CACNB3P54284 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC21.13■□□□□ 0.97
CACNB3P54284 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 AC073592.3-201ENST00000625118 1834 ntBASIC21.13■□□□□ 0.97
CACNB3P54284 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
CACNB3P54284 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB3P54284 NKTR-203ENST00000442970 646 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.12■□□□□ 0.97
CACNB3P54284 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB3P54284 AC040169.1-201ENST00000565382 521 ntBASIC21.12■□□□□ 0.97
CACNB3P54284 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC21.12■□□□□ 0.97
CACNB3P54284 CYB561-217ENST00000582997 877 ntTSL 5 BASIC21.12■□□□□ 0.97
CACNB3P54284 HOTTIP_1.1-201ENST00000620415 57 ntBASIC21.12■□□□□ 0.97
CACNB3P54284 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 AL096828.2-201ENST00000567259 1965 ntBASIC21.12■□□□□ 0.97
CACNB3P54284 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.12■□□□□ 0.97
CACNB3P54284 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
CACNB3P54284 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNB3P54284 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 AC100803.2-201ENST00000562459 1963 ntBASIC21.11■□□□□ 0.97
CACNB3P54284 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC21.11■□□□□ 0.97
CACNB3P54284 KRT18P2-201ENST00000447938 1258 ntBASIC21.11■□□□□ 0.97
CACNB3P54284 COPE-211ENST00000600932 1144 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNB3P54284 MIR1199-201ENST00000621445 119 ntBASIC21.11■□□□□ 0.97
CACNB3P54284 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC21.11■□□□□ 0.97
CACNB3P54284 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 AP000974.1-201ENST00000623909 2387 ntBASIC21.11■□□□□ 0.97
CACNB3P54284 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNB3P54284 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC21.11■□□□□ 0.97
CACNB3P54284 SIGLEC16-201ENST00000599858 1437 ntBASIC21.11■□□□□ 0.97
CACNB3P54284 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
CACNB3P54284 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC21.11■□□□□ 0.97
CACNB3P54284 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 WDR59-202ENST00000536050 1752 ntTSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC21.1■□□□□ 0.97
CACNB3P54284 COX5BP2-201ENST00000392354 334 ntBASIC21.1■□□□□ 0.97
CACNB3P54284 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 AC108751.1-201ENST00000490852 363 ntBASIC21.1■□□□□ 0.97
CACNB3P54284 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC21.1■□□□□ 0.97
CACNB3P54284 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC21.1■□□□□ 0.97
CACNB3P54284 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC21.1■□□□□ 0.97
CACNB3P54284 AC064836.3-201ENST00000607928 673 ntBASIC21.1■□□□□ 0.97
CACNB3P54284 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC21.1■□□□□ 0.97
CACNB3P54284 AC005593.1-201ENST00000624894 515 ntBASIC21.1■□□□□ 0.97
CACNB3P54284 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 AC132938.5-201ENST00000624980 1813 ntBASIC21.1■□□□□ 0.97
CACNB3P54284 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
CACNB3P54284 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC21.1■□□□□ 0.97
CACNB3P54284 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms