Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC22.16■■□□□ 1.14
NUP98P52948 AC112482.1-201ENST00000492080 688 ntBASIC22.16■■□□□ 1.14
NUP98P52948 AL139424.1-201ENST00000607572 797 ntBASIC22.16■■□□□ 1.14
NUP98P52948 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 AC009336.1-201ENST00000608941 1553 ntBASIC22.16■■□□□ 1.14
NUP98P52948 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
NUP98P52948 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC22.16■■□□□ 1.14
NUP98P52948 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
NUP98P52948 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
NUP98P52948 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUP98P52948 AC003669.1-201ENST00000334569 611 ntBASIC22.15■■□□□ 1.14
NUP98P52948 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC22.15■■□□□ 1.14
NUP98P52948 AC004967.1-201ENST00000453589 447 ntBASIC22.15■■□□□ 1.14
NUP98P52948 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC22.15■■□□□ 1.14
NUP98P52948 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUP98P52948 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC22.15■■□□□ 1.14
NUP98P52948 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUP98P52948 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
NUP98P52948 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC22.15■■□□□ 1.14
NUP98P52948 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
NUP98P52948 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC22.15■■□□□ 1.14
NUP98P52948 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 COA5-202ENST00000409997 557 ntTSL 4 BASIC22.15■■□□□ 1.14
NUP98P52948 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC22.15■■□□□ 1.14
NUP98P52948 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC22.15■■□□□ 1.14
NUP98P52948 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC22.15■■□□□ 1.14
NUP98P52948 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NUP98P52948 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
NUP98P52948 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC22.14■■□□□ 1.14
NUP98P52948 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
NUP98P52948 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC22.14■■□□□ 1.13
NUP98P52948 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC22.14■■□□□ 1.13
NUP98P52948 COX5A-206ENST00000568783 571 ntTSL 3 BASIC22.14■■□□□ 1.13
NUP98P52948 AC092865.6-201ENST00000642101 219 ntBASIC22.14■■□□□ 1.13
NUP98P52948 GAB3-203ENST00000424127 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC22.14■■□□□ 1.13
NUP98P52948 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
NUP98P52948 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC22.14■■□□□ 1.13
NUP98P52948 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC22.13■■□□□ 1.13
NUP98P52948 RPS15P9-201ENST00000494093 319 ntBASIC22.13■■□□□ 1.13
NUP98P52948 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC22.13■■□□□ 1.13
NUP98P52948 BRICD5-202ENST00000562360 783 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC22.13■■□□□ 1.13
NUP98P52948 AC134684.3-201ENST00000641758 218 ntBASIC22.13■■□□□ 1.13
NUP98P52948 AP000974.1-201ENST00000623909 2387 ntBASIC22.13■■□□□ 1.13
NUP98P52948 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC22.13■■□□□ 1.13
NUP98P52948 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 GPR89P-201ENST00000407924 1495 ntBASIC22.13■■□□□ 1.13
NUP98P52948 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
NUP98P52948 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC22.13■■□□□ 1.13
NUP98P52948 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC22.13■■□□□ 1.13
NUP98P52948 TMED1-207ENST00000591695 809 ntTSL 5 BASIC22.13■■□□□ 1.13
NUP98P52948 MTDHP5-201ENST00000598980 586 ntBASIC22.13■■□□□ 1.13
NUP98P52948 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.13■■□□□ 1.13
NUP98P52948 AC005593.1-201ENST00000624894 515 ntBASIC22.13■■□□□ 1.13
NUP98P52948 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC22.13■■□□□ 1.13
NUP98P52948 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUP98P52948 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC22.12■■□□□ 1.13
NUP98P52948 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC22.12■■□□□ 1.13
NUP98P52948 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUP98P52948 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUP98P52948 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
NUP98P52948 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.12■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms