Protein–RNA interactions for Protein: P51788

CLCN2, Chloride channel protein 2, humanhuman

Predictions only

Length 898 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN2P51788 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN2P51788 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.37■□□□□ 0.37
CLCN2P51788 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.37■□□□□ 0.37
CLCN2P51788 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.37■□□□□ 0.37
CLCN2P51788 NTF6B-201ENST00000591913 560 ntBASIC17.37■□□□□ 0.37
CLCN2P51788 AL445228.2-201ENST00000605589 952 ntBASIC17.37■□□□□ 0.37
CLCN2P51788 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
CLCN2P51788 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN2P51788 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.37■□□□□ 0.37
CLCN2P51788 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CLCN2P51788 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC17.37■□□□□ 0.37
CLCN2P51788 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CLCN2P51788 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CLCN2P51788 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 ARMC10P1-201ENST00000313754 855 ntBASIC17.36■□□□□ 0.37
CLCN2P51788 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCN2P51788 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.36■□□□□ 0.37
CLCN2P51788 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC17.36■□□□□ 0.37
CLCN2P51788 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCN2P51788 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
CLCN2P51788 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC17.36■□□□□ 0.37
CLCN2P51788 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.36■□□□□ 0.37
CLCN2P51788 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
CLCN2P51788 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 AL162727.3-201ENST00000635661 2787 ntBASIC17.35■□□□□ 0.37
CLCN2P51788 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 AP001094.4-201ENST00000579008 2176 ntBASIC17.35■□□□□ 0.37
CLCN2P51788 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN2P51788 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN2P51788 ETFA-216ENST00000560726 942 ntTSL 3 BASIC17.35■□□□□ 0.37
CLCN2P51788 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC17.35■□□□□ 0.37
CLCN2P51788 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
CLCN2P51788 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC17.35■□□□□ 0.37
CLCN2P51788 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms