Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
USP11P51784 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
USP11P51784 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
USP11P51784 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP11P51784 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
USP11P51784 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.22■□□□□ 0.83
USP11P51784 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
USP11P51784 AC007967.3-201ENST00000434308 558 ntBASIC20.22■□□□□ 0.83
USP11P51784 FOSL1P1-201ENST00000511041 816 ntBASIC20.22■□□□□ 0.83
USP11P51784 TOLLIP-AS1-201ENST00000530897 939 ntBASIC20.22■□□□□ 0.83
USP11P51784 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.22■□□□□ 0.83
USP11P51784 NFATC1-206ENST00000542384 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC20.22■□□□□ 0.83
USP11P51784 AL121772.3-201ENST00000610840 674 ntBASIC20.22■□□□□ 0.83
USP11P51784 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC20.22■□□□□ 0.83
USP11P51784 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
USP11P51784 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.22■□□□□ 0.83
USP11P51784 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
USP11P51784 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC20.22■□□□□ 0.83
USP11P51784 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP11P51784 AC010460.3-201ENST00000511359 1579 ntBASIC20.21■□□□□ 0.83
USP11P51784 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
USP11P51784 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 AC009949.1-201ENST00000623048 1830 ntBASIC20.21■□□□□ 0.83
USP11P51784 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.21■□□□□ 0.83
USP11P51784 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
USP11P51784 AC026471.1-201ENST00000564629 3026 ntBASIC20.21■□□□□ 0.83
USP11P51784 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 COX5BP2-201ENST00000392354 334 ntBASIC20.21■□□□□ 0.83
USP11P51784 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC20.21■□□□□ 0.83
USP11P51784 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC20.21■□□□□ 0.83
USP11P51784 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.21■□□□□ 0.83
USP11P51784 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.21■□□□□ 0.83
USP11P51784 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP11P51784 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
USP11P51784 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
USP11P51784 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
USP11P51784 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC20.2■□□□□ 0.82
USP11P51784 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC20.2■□□□□ 0.82
USP11P51784 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC20.2■□□□□ 0.82
USP11P51784 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 RCN1P2-201ENST00000398357 915 ntBASIC20.2■□□□□ 0.82
USP11P51784 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 DUSP5P1-201ENST00000441325 1139 ntBASIC20.2■□□□□ 0.82
USP11P51784 SDHD-206ENST00000528182 754 ntTSL 3 BASIC20.2■□□□□ 0.82
USP11P51784 MIR5100-201ENST00000579544 119 ntBASIC20.2■□□□□ 0.82
USP11P51784 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.2■□□□□ 0.82
USP11P51784 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
USP11P51784 AC114341.1-201ENST00000618070 349 ntBASIC20.2■□□□□ 0.82
USP11P51784 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC20.2■□□□□ 0.82
USP11P51784 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
USP11P51784 INTS4P1-201ENST00000438455 1935 ntBASIC20.19■□□□□ 0.82
USP11P51784 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.19■□□□□ 0.82
USP11P51784 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 CD9-202ENST00000382515 1229 ntTSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
USP11P51784 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
USP11P51784 PON3-205ENST00000451904 1053 ntTSL 3 BASIC20.19■□□□□ 0.82
USP11P51784 AC096582.2-201ENST00000510860 516 ntBASIC20.19■□□□□ 0.82
USP11P51784 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC20.19■□□□□ 0.82
USP11P51784 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms