Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC19.9■□□□□ 0.78
BRCA2P51587 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC19.9■□□□□ 0.78
BRCA2P51587 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCA2P51587 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCA2P51587 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
BRCA2P51587 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
BRCA2P51587 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC19.89■□□□□ 0.78
BRCA2P51587 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
BRCA2P51587 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC19.89■□□□□ 0.78
BRCA2P51587 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
BRCA2P51587 CYB561-217ENST00000582997 877 ntTSL 5 BASIC19.89■□□□□ 0.78
BRCA2P51587 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC19.89■□□□□ 0.78
BRCA2P51587 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
BRCA2P51587 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.78
BRCA2P51587 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
BRCA2P51587 AC025580.3-201ENST00000617932 1424 ntBASIC19.89■□□□□ 0.77
BRCA2P51587 AL161938.1-201ENST00000569833 2180 ntBASIC19.89■□□□□ 0.77
BRCA2P51587 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
BRCA2P51587 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 LINC01485-205ENST00000523617 586 ntTSL 2 BASIC19.89■□□□□ 0.77
BRCA2P51587 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC19.89■□□□□ 0.77
BRCA2P51587 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
BRCA2P51587 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.89■□□□□ 0.77
BRCA2P51587 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 RAC2-204ENST00000406508 893 ntTSL 5 BASIC19.89■□□□□ 0.77
BRCA2P51587 PMS2P4-201ENST00000412466 1052 ntBASIC19.89■□□□□ 0.77
BRCA2P51587 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC19.89■□□□□ 0.77
BRCA2P51587 FAM86GP-201ENST00000448322 971 ntBASIC19.89■□□□□ 0.77
BRCA2P51587 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC19.89■□□□□ 0.77
BRCA2P51587 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
BRCA2P51587 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
BRCA2P51587 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
BRCA2P51587 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC19.88■□□□□ 0.77
BRCA2P51587 PGM5P2-202ENST00000637225 1043 ntBASIC19.88■□□□□ 0.77
BRCA2P51587 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
BRCA2P51587 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 GRAP-202ENST00000395635 834 ntTSL 2 BASIC19.88■□□□□ 0.77
BRCA2P51587 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
BRCA2P51587 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC19.88■□□□□ 0.77
BRCA2P51587 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 CRYGEP-201ENST00000412192 528 ntBASIC19.88■□□□□ 0.77
BRCA2P51587 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC19.88■□□□□ 0.77
BRCA2P51587 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
BRCA2P51587 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.88■□□□□ 0.77
BRCA2P51587 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
BRCA2P51587 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.87■□□□□ 0.77
BRCA2P51587 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCA2P51587 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 AL022341.1-201ENST00000455294 389 ntTSL 2 BASIC19.87■□□□□ 0.77
BRCA2P51587 RNA5SP421-201ENST00000516864 134 ntBASIC19.87■□□□□ 0.77
BRCA2P51587 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCA2P51587 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC19.87■□□□□ 0.77
BRCA2P51587 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 KRT8P47-201ENST00000604727 1398 ntBASIC19.87■□□□□ 0.77
BRCA2P51587 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 SNHG11-201ENST00000359074 1031 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC19.87■□□□□ 0.77
BRCA2P51587 INGX-202ENST00000489074 768 ntBASIC19.87■□□□□ 0.77
BRCA2P51587 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC19.87■□□□□ 0.77
BRCA2P51587 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC19.87■□□□□ 0.77
BRCA2P51587 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
BRCA2P51587 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 FAM207CP-201ENST00000443486 507 ntBASIC19.86■□□□□ 0.77
BRCA2P51587 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC19.86■□□□□ 0.77
BRCA2P51587 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
BRCA2P51587 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
BRCA2P51587 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.86■□□□□ 0.77
BRCA2P51587 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 PTGES2-AS1-201ENST00000443493 2100 ntBASIC19.86■□□□□ 0.77
BRCA2P51587 CRB3P1-201ENST00000449338 276 ntBASIC19.86■□□□□ 0.77
BRCA2P51587 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.86■□□□□ 0.77
BRCA2P51587 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.86■□□□□ 0.77
BRCA2P51587 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
BRCA2P51587 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms