Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 AP005117.1-201ENST00000584346 1413 ntBASIC16.95■□□□□ 0.3
GABRA4P48169 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.95■□□□□ 0.3
GABRA4P48169 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC16.95■□□□□ 0.3
GABRA4P48169 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC16.94■□□□□ 0.3
GABRA4P48169 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 COX5BP2-201ENST00000392354 334 ntBASIC16.94■□□□□ 0.3
GABRA4P48169 MRPL3P1-201ENST00000400109 1033 ntBASIC16.94■□□□□ 0.3
GABRA4P48169 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.94■□□□□ 0.3
GABRA4P48169 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC16.94■□□□□ 0.3
GABRA4P48169 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC16.94■□□□□ 0.3
GABRA4P48169 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC16.94■□□□□ 0.3
GABRA4P48169 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 AC008608.2-201ENST00000606089 416 ntBASIC16.94■□□□□ 0.3
GABRA4P48169 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC16.94■□□□□ 0.3
GABRA4P48169 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 FLJ13224-201ENST00000313737 1514 ntBASIC16.94■□□□□ 0.3
GABRA4P48169 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.94■□□□□ 0.3
GABRA4P48169 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
GABRA4P48169 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.94■□□□□ 0.3
GABRA4P48169 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GABRA4P48169 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 STK4-201ENST00000372801 2038 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.93■□□□□ 0.3
GABRA4P48169 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC16.93■□□□□ 0.3
GABRA4P48169 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.93■□□□□ 0.3
GABRA4P48169 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.93■□□□□ 0.3
GABRA4P48169 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 AP000867.4-201ENST00000641616 219 ntBASIC16.93■□□□□ 0.3
GABRA4P48169 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
GABRA4P48169 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.93■□□□□ 0.3
GABRA4P48169 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
GABRA4P48169 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
GABRA4P48169 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRA4P48169 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
GABRA4P48169 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.92■□□□□ 0.3
GABRA4P48169 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC16.92■□□□□ 0.3
GABRA4P48169 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
GABRA4P48169 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC16.92■□□□□ 0.3
GABRA4P48169 PPIE-208ENST00000470213 927 ntTSL 3 BASIC16.92■□□□□ 0.3
GABRA4P48169 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRA4P48169 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC16.92■□□□□ 0.3
GABRA4P48169 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
GABRA4P48169 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
GABRA4P48169 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.92■□□□□ 0.3
GABRA4P48169 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms