Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC19.01■□□□□ 0.63
BRCC3P46736 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
BRCC3P46736 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC19.01■□□□□ 0.63
BRCC3P46736 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 AC009113.1-201ENST00000570267 2443 ntBASIC19■□□□□ 0.63
BRCC3P46736 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19■□□□□ 0.63
BRCC3P46736 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 TEX30-205ENST00000376029 959 ntTSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 TLE1-202ENST00000376484 666 ntTSL 3 BASIC19■□□□□ 0.63
BRCC3P46736 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 SLC25A1P1-201ENST00000528351 927 ntBASIC19■□□□□ 0.63
BRCC3P46736 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 NKAPP1-205ENST00000585790 367 ntBASIC19■□□□□ 0.63
BRCC3P46736 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
BRCC3P46736 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 ADM-208ENST00000534464 1640 ntTSL 2 BASIC19■□□□□ 0.63
BRCC3P46736 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
BRCC3P46736 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.99■□□□□ 0.63
BRCC3P46736 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
BRCC3P46736 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC18.99■□□□□ 0.63
BRCC3P46736 RPS2P1-201ENST00000434010 821 ntBASIC18.99■□□□□ 0.63
BRCC3P46736 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC18.99■□□□□ 0.63
BRCC3P46736 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.99■□□□□ 0.63
BRCC3P46736 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC18.99■□□□□ 0.63
BRCC3P46736 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 AF228730.7-201ENST00000641842 219 ntBASIC18.99■□□□□ 0.63
BRCC3P46736 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 CD40-202ENST00000372285 1729 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
BRCC3P46736 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC18.99■□□□□ 0.63
BRCC3P46736 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC18.98■□□□□ 0.63
BRCC3P46736 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.98■□□□□ 0.63
BRCC3P46736 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.98■□□□□ 0.63
BRCC3P46736 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC18.98■□□□□ 0.63
BRCC3P46736 AC012645.3-201ENST00000568506 470 ntTSL 3 BASIC18.98■□□□□ 0.63
BRCC3P46736 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC18.98■□□□□ 0.63
BRCC3P46736 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 SIRPAP1-201ENST00000448467 1770 ntBASIC18.98■□□□□ 0.63
BRCC3P46736 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
BRCC3P46736 AP000997.3-201ENST00000623333 2250 ntBASIC18.98■□□□□ 0.63
BRCC3P46736 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
BRCC3P46736 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.98■□□□□ 0.63
BRCC3P46736 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
BRCC3P46736 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
BRCC3P46736 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
BRCC3P46736 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms