Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
NKX2-1P43699 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-1P43699 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NKX2-1P43699 MTDHP1-201ENST00000605323 784 ntBASIC14.69□□□□□ -0.06
NKX2-1P43699 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC14.69□□□□□ -0.06
NKX2-1P43699 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC14.69□□□□□ -0.06
NKX2-1P43699 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
NKX2-1P43699 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
NKX2-1P43699 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.69□□□□□ -0.06
NKX2-1P43699 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
NKX2-1P43699 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
NKX2-1P43699 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-1P43699 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 AC018695.7-201ENST00000624587 2492 ntBASIC14.68□□□□□ -0.06
NKX2-1P43699 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC14.68□□□□□ -0.06
NKX2-1P43699 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 AL023284.2-201ENST00000405850 579 ntBASIC14.68□□□□□ -0.06
NKX2-1P43699 PPP1R14BP5-201ENST00000440334 435 ntBASIC14.68□□□□□ -0.06
NKX2-1P43699 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC14.68□□□□□ -0.06
NKX2-1P43699 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.68□□□□□ -0.06
NKX2-1P43699 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 AC008622.2-201ENST00000617006 1229 ntBASIC14.68□□□□□ -0.06
NKX2-1P43699 AC011298.2-201ENST00000617989 482 ntBASIC14.68□□□□□ -0.06
NKX2-1P43699 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
NKX2-1P43699 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
NKX2-1P43699 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
NKX2-1P43699 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 XKR7-201ENST00000562532 7844 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
NKX2-1P43699 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 APOA5-203ENST00000542499 1929 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX2-1P43699 KIRREL3-AS3-201ENST00000404882 831 ntBASIC14.67□□□□□ -0.06
NKX2-1P43699 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 EMC9-206ENST00000560403 872 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC14.67□□□□□ -0.06
NKX2-1P43699 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX2-1P43699 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
NKX2-1P43699 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC14.67□□□□□ -0.06
NKX2-1P43699 ANKFY1-202ENST00000570535 6458 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
NKX2-1P43699 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
NKX2-1P43699 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NKX2-1P43699 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC14.66□□□□□ -0.06
NKX2-1P43699 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
NKX2-1P43699 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms