Protein–RNA interactions for Protein: P42830

CXCL5, C-X-C motif chemokine 5, humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL5P42830 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 RCC1-202ENST00000373832 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 AC103702.1-201ENST00000548801 2630 ntBASIC12.11□□□□□ -0.47
CXCL5P42830 COL4A3BP-204ENST00000405807 2843 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CXCL5P42830 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CXCL5P42830 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
CXCL5P42830 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.11□□□□□ -0.47
CXCL5P42830 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC12.11□□□□□ -0.47
CXCL5P42830 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CXCL5P42830 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CXCL5P42830 BUB3-202ENST00000368859 667 ntTSL 3 BASIC12.11□□□□□ -0.47
CXCL5P42830 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC12.11□□□□□ -0.47
CXCL5P42830 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 AP000692.2-201ENST00000608391 879 ntBASIC12.11□□□□□ -0.47
CXCL5P42830 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
CXCL5P42830 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 SOX30-202ENST00000311371 2716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 CICP6-201ENST00000457191 2729 ntBASIC12.11□□□□□ -0.47
CXCL5P42830 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 CYP51A1P1-201ENST00000492267 1507 ntBASIC12.11□□□□□ -0.47
CXCL5P42830 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC12.11□□□□□ -0.47
CXCL5P42830 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
CXCL5P42830 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CXCL5P42830 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL5P42830 AC096733.2-201ENST00000609937 1394 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 B3GAT3P1-201ENST00000471720 806 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC12.1□□□□□ -0.47
CXCL5P42830 FDX2-207ENST00000494368 584 ntTSL 4 BASIC12.1□□□□□ -0.47
CXCL5P42830 RARRES2P10-201ENST00000564312 460 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC12.1□□□□□ -0.47
CXCL5P42830 AC233263.1-201ENST00000578059 224 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 RN7SL471P-201ENST00000580476 299 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL5P42830 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
CXCL5P42830 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
CXCL5P42830 HOXB1-202ENST00000577092 1414 ntBASIC12.1□□□□□ -0.47
CXCL5P42830 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
CXCL5P42830 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC12.1□□□□□ -0.47
CXCL5P42830 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC12.09□□□□□ -0.47
CXCL5P42830 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
CXCL5P42830 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
CXCL5P42830 C4A-243ENST00000428956 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 C4B-202ENST00000435363 5460 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
CXCL5P42830 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms