Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 WWOX-216ENST00000569818 525 ntBASIC17.26■□□□□ 0.35
CAPN3P20807 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPN3P20807 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC17.26■□□□□ 0.35
CAPN3P20807 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.26■□□□□ 0.35
CAPN3P20807 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC17.26■□□□□ 0.35
CAPN3P20807 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CAPN3P20807 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CAPN3P20807 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
CAPN3P20807 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN3P20807 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPN3P20807 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN3P20807 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.25■□□□□ 0.35
CAPN3P20807 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
CAPN3P20807 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CAPN3P20807 GRAMD4P8-201ENST00000605465 1115 ntBASIC17.25■□□□□ 0.35
CAPN3P20807 CR769767.2-201ENST00000622735 460 ntBASIC17.25■□□□□ 0.35
CAPN3P20807 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.25■□□□□ 0.35
CAPN3P20807 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 BCL2-203ENST00000589955 5011 ntBASIC17.25■□□□□ 0.35
CAPN3P20807 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
CAPN3P20807 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 CROCCP2-202ENST00000412962 2773 ntBASIC17.25■□□□□ 0.35
CAPN3P20807 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.25■□□□□ 0.35
CAPN3P20807 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC17.25■□□□□ 0.35
CAPN3P20807 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
CAPN3P20807 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 AL138688.1-201ENST00000624851 1594 ntBASIC17.24■□□□□ 0.35
CAPN3P20807 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN3P20807 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 AC133963.1-201ENST00000504166 1679 ntBASIC17.24■□□□□ 0.35
CAPN3P20807 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 DUTP2-201ENST00000519164 463 ntBASIC17.24■□□□□ 0.35
CAPN3P20807 C2orf69P3-201ENST00000565542 1120 ntBASIC17.24■□□□□ 0.35
CAPN3P20807 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.24■□□□□ 0.35
CAPN3P20807 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.24■□□□□ 0.35
CAPN3P20807 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.24■□□□□ 0.35
CAPN3P20807 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
CAPN3P20807 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
CAPN3P20807 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
CAPN3P20807 NKILA-202ENST00000614771 2598 ntBASIC17.24■□□□□ 0.35
CAPN3P20807 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms