Protein–RNA interactions for Protein: P19387

POLR2C, DNA-directed RNA polymerase II subunit RPB3, humanhuman

Predicted RBP Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2CP19387 AC005336.2-201ENST00000593183 939 ntBASIC17.34■□□□□ 0.37
POLR2CP19387 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
POLR2CP19387 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.34■□□□□ 0.37
POLR2CP19387 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2CP19387 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2CP19387 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.34■□□□□ 0.37
POLR2CP19387 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
POLR2CP19387 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.37
POLR2CP19387 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.33■□□□□ 0.37
POLR2CP19387 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 AC106820.2-201ENST00000563775 3264 ntBASIC17.33■□□□□ 0.37
POLR2CP19387 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC17.33■□□□□ 0.37
POLR2CP19387 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.33■□□□□ 0.37
POLR2CP19387 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.33■□□□□ 0.37
POLR2CP19387 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
POLR2CP19387 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.36
POLR2CP19387 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
POLR2CP19387 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
POLR2CP19387 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2CP19387 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR2CP19387 KRT18P31-201ENST00000506277 1292 ntBASIC17.33■□□□□ 0.36
POLR2CP19387 UNC93B7-201ENST00000509439 705 ntBASIC17.33■□□□□ 0.36
POLR2CP19387 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR2CP19387 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR2CP19387 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.33■□□□□ 0.36
POLR2CP19387 AL691432.3-201ENST00000621860 400 ntBASIC17.33■□□□□ 0.36
POLR2CP19387 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2CP19387 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.33■□□□□ 0.36
POLR2CP19387 REXO1L9P-201ENST00000604264 2108 ntBASIC17.33■□□□□ 0.36
POLR2CP19387 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
POLR2CP19387 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC17.33■□□□□ 0.36
POLR2CP19387 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
POLR2CP19387 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR2CP19387 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.32■□□□□ 0.36
POLR2CP19387 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR2CP19387 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.32■□□□□ 0.36
POLR2CP19387 AC096582.2-201ENST00000510860 516 ntBASIC17.32■□□□□ 0.36
POLR2CP19387 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 FICD-205ENST00000552758 603 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR2CP19387 AC111152.3-201ENST00000569699 673 ntBASIC17.32■□□□□ 0.36
POLR2CP19387 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 BNIP3P18-201ENST00000593976 575 ntBASIC17.32■□□□□ 0.36
POLR2CP19387 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC17.32■□□□□ 0.36
POLR2CP19387 CCNC-219ENST00000627680 896 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 RAB43-201ENST00000315150 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
POLR2CP19387 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 ALKBH5-203ENST00000541285 1605 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
POLR2CP19387 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.32■□□□□ 0.36
POLR2CP19387 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
POLR2CP19387 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2CP19387 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
POLR2CP19387 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR2CP19387 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
POLR2CP19387 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR2CP19387 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 AC009041.2-206ENST00000563863 1728 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2CP19387 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
POLR2CP19387 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.31■□□□□ 0.36
POLR2CP19387 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC17.31■□□□□ 0.36
POLR2CP19387 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms