Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
NCK1P16333 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 TBC1D2-205ENST00000465784 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
NCK1P16333 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.94■□□□□ 0.3
NCK1P16333 KRT18P6-201ENST00000555540 1265 ntBASIC16.94■□□□□ 0.3
NCK1P16333 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NCK1P16333 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC16.94■□□□□ 0.3
NCK1P16333 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
NCK1P16333 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.94■□□□□ 0.3
NCK1P16333 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
NCK1P16333 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.93■□□□□ 0.3
NCK1P16333 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC16.93■□□□□ 0.3
NCK1P16333 SAPCD2P4-201ENST00000424595 1171 ntBASIC16.93■□□□□ 0.3
NCK1P16333 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 AC128676.1-201ENST00000454392 318 ntBASIC16.93■□□□□ 0.3
NCK1P16333 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 AC097488.1-201ENST00000507834 756 ntBASIC16.93■□□□□ 0.3
NCK1P16333 RPPH1-201ENST00000516869 333 ntBASIC16.93■□□□□ 0.3
NCK1P16333 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.93■□□□□ 0.3
NCK1P16333 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
NCK1P16333 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.93■□□□□ 0.3
NCK1P16333 AC008894.3-201ENST00000624324 3103 ntBASIC16.93■□□□□ 0.3
NCK1P16333 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.93■□□□□ 0.3
NCK1P16333 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.93■□□□□ 0.3
NCK1P16333 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.93■□□□□ 0.3
NCK1P16333 LINC00304-203ENST00000565008 1864 ntBASIC16.93■□□□□ 0.3
NCK1P16333 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
NCK1P16333 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.92■□□□□ 0.3
NCK1P16333 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
NCK1P16333 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.92■□□□□ 0.3
NCK1P16333 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.92■□□□□ 0.3
NCK1P16333 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
NCK1P16333 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC16.92■□□□□ 0.3
NCK1P16333 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms