Protein–RNA interactions for Protein: P11387

TOP1, DNA topoisomerase 1, humanhuman

Known RBP Predictions only

Length 765 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1P11387 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 FICD-205ENST00000552758 603 ntTSL 2 BASIC21.02■□□□□ 0.96
TOP1P11387 AL732292.2-201ENST00000609649 430 ntBASIC21.02■□□□□ 0.96
TOP1P11387 CCNC-219ENST00000627680 896 ntTSL 5 BASIC21.02■□□□□ 0.96
TOP1P11387 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC21.02■□□□□ 0.96
TOP1P11387 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC21.02■□□□□ 0.96
TOP1P11387 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
TOP1P11387 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
TOP1P11387 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC21.02■□□□□ 0.96
TOP1P11387 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TOP1P11387 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
TOP1P11387 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.95
TOP1P11387 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
TOP1P11387 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
TOP1P11387 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC21.01■□□□□ 0.95
TOP1P11387 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 CCS-201ENST00000310190 942 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC21.01■□□□□ 0.95
TOP1P11387 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 KRT18P31-201ENST00000506277 1292 ntBASIC21.01■□□□□ 0.95
TOP1P11387 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 UNC93B7-201ENST00000509439 705 ntBASIC21.01■□□□□ 0.95
TOP1P11387 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC21.01■□□□□ 0.95
TOP1P11387 AC091304.2-201ENST00000564639 760 ntBASIC21.01■□□□□ 0.95
TOP1P11387 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC21.01■□□□□ 0.95
TOP1P11387 BNIP3P18-201ENST00000593976 575 ntBASIC21.01■□□□□ 0.95
TOP1P11387 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC21.01■□□□□ 0.95
TOP1P11387 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
TOP1P11387 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 NOC2LP1-202ENST00000452600 2235 ntBASIC21.01■□□□□ 0.95
TOP1P11387 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
TOP1P11387 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
TOP1P11387 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC21■□□□□ 0.95
TOP1P11387 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
TOP1P11387 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 POM121L3P-201ENST00000419331 1163 ntBASIC21■□□□□ 0.95
TOP1P11387 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC21■□□□□ 0.95
TOP1P11387 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC21■□□□□ 0.95
TOP1P11387 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
TOP1P11387 AL138831.2-201ENST00000606564 490 ntBASIC21■□□□□ 0.95
TOP1P11387 IRF5-214ENST00000613821 595 ntTSL 5 BASIC21■□□□□ 0.95
TOP1P11387 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC21■□□□□ 0.95
TOP1P11387 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
TOP1P11387 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21■□□□□ 0.95
TOP1P11387 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC21■□□□□ 0.95
TOP1P11387 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC21■□□□□ 0.95
TOP1P11387 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC20.99■□□□□ 0.95
TOP1P11387 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 PCDHB18P-201ENST00000524813 2368 ntBASIC20.99■□□□□ 0.95
TOP1P11387 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 C18orf32-201ENST00000318240 1128 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
TOP1P11387 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
TOP1P11387 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
TOP1P11387 PP7080-204ENST00000510714 601 ntTSL 3 BASIC20.99■□□□□ 0.95
TOP1P11387 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC20.99■□□□□ 0.95
TOP1P11387 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.99■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms