Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC20■□□□□ 0.79
RARBP10826 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC20■□□□□ 0.79
RARBP10826 PRYP5-201ENST00000451909 266 ntBASIC20■□□□□ 0.79
RARBP10826 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC20■□□□□ 0.79
RARBP10826 AC136632.2-201ENST00000512891 861 ntBASIC20■□□□□ 0.79
RARBP10826 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC20■□□□□ 0.79
RARBP10826 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC20■□□□□ 0.79
RARBP10826 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC20■□□□□ 0.79
RARBP10826 COPE-211ENST00000600932 1144 ntTSL 5 BASIC20■□□□□ 0.79
RARBP10826 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC20■□□□□ 0.79
RARBP10826 ACP5-201ENST00000218758 1630 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
RARBP10826 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
RARBP10826 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC20■□□□□ 0.79
RARBP10826 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC20■□□□□ 0.79
RARBP10826 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 MED29-202ENST00000594368 1471 ntTSL 2 BASIC19.99■□□□□ 0.79
RARBP10826 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
RARBP10826 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.99■□□□□ 0.79
RARBP10826 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC19.99■□□□□ 0.79
RARBP10826 AC073621.1-201ENST00000392730 636 ntBASIC19.99■□□□□ 0.79
RARBP10826 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC19.99■□□□□ 0.79
RARBP10826 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.99■□□□□ 0.79
RARBP10826 AC122714.2-201ENST00000502787 707 ntBASIC19.99■□□□□ 0.79
RARBP10826 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC19.99■□□□□ 0.79
RARBP10826 RPS15-207ENST00000591032 550 ntTSL 3 BASIC19.99■□□□□ 0.79
RARBP10826 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC19.99■□□□□ 0.79
RARBP10826 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC19.99■□□□□ 0.79
RARBP10826 GMCL1P1-201ENST00000463439 1581 ntBASIC19.99■□□□□ 0.79
RARBP10826 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC19.99■□□□□ 0.79
RARBP10826 AP000974.1-201ENST00000623909 2387 ntBASIC19.99■□□□□ 0.79
RARBP10826 AC004817.3-201ENST00000602957 2129 ntBASIC19.99■□□□□ 0.79
RARBP10826 AC005082.1-201ENST00000413042 2259 ntBASIC19.99■□□□□ 0.79
RARBP10826 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
RARBP10826 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC19.98■□□□□ 0.79
RARBP10826 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC19.98■□□□□ 0.79
RARBP10826 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 AC096633.1-201ENST00000422446 749 ntBASIC19.98■□□□□ 0.79
RARBP10826 AP006288.1-201ENST00000446065 395 ntBASIC19.98■□□□□ 0.79
RARBP10826 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC19.98■□□□□ 0.79
RARBP10826 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 AD001527.2-201ENST00000622994 785 ntBASIC19.98■□□□□ 0.79
RARBP10826 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
RARBP10826 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
RARBP10826 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC19.98■□□□□ 0.79
RARBP10826 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
RARBP10826 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC19.98■□□□□ 0.79
RARBP10826 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.97■□□□□ 0.79
RARBP10826 TNXA-203ENST00000507684 2038 ntBASIC19.97■□□□□ 0.79
RARBP10826 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC19.97■□□□□ 0.79
RARBP10826 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 SIGLEC16-201ENST00000599858 1437 ntBASIC19.97■□□□□ 0.79
RARBP10826 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 LBH-203ENST00000404397 543 ntTSL 4 BASIC19.97■□□□□ 0.79
RARBP10826 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC19.97■□□□□ 0.79
RARBP10826 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC19.97■□□□□ 0.79
RARBP10826 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
RARBP10826 LINC02084-201ENST00000606069 1096 ntBASIC19.97■□□□□ 0.79
RARBP10826 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.97■□□□□ 0.79
RARBP10826 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.97■□□□□ 0.79
RARBP10826 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
RARBP10826 AC132938.6-201ENST00000623828 1655 ntBASIC19.97■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms