Protein–RNA interactions for Protein: P09326

CD48, CD48 antigen, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD48P09326 AC005332.3-201ENST00000589904 676 ntBASIC18.57■□□□□ 0.56
CD48P09326 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
CD48P09326 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.57■□□□□ 0.56
CD48P09326 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
CD48P09326 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
CD48P09326 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
CD48P09326 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC18.57■□□□□ 0.56
CD48P09326 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.57■□□□□ 0.56
CD48P09326 AL353692.3-201ENST00000407031 1396 ntBASIC18.56■□□□□ 0.56
CD48P09326 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.56■□□□□ 0.56
CD48P09326 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC18.56■□□□□ 0.56
CD48P09326 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 TSPY12P-201ENST00000421279 868 ntBASIC18.56■□□□□ 0.56
CD48P09326 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 AL671277.2-201ENST00000458060 996 ntBASIC18.56■□□□□ 0.56
CD48P09326 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC18.56■□□□□ 0.56
CD48P09326 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 GPR32P1-201ENST00000601788 811 ntBASIC18.56■□□□□ 0.56
CD48P09326 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC18.56■□□□□ 0.56
CD48P09326 AC009154.2-201ENST00000621177 724 ntBASIC18.56■□□□□ 0.56
CD48P09326 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.56■□□□□ 0.56
CD48P09326 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC18.56■□□□□ 0.56
CD48P09326 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC18.56■□□□□ 0.56
CD48P09326 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CD48P09326 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CD48P09326 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.55■□□□□ 0.56
CD48P09326 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC18.55■□□□□ 0.56
CD48P09326 AL390719.2-201ENST00000606993 987 ntBASIC18.55■□□□□ 0.56
CD48P09326 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC18.55■□□□□ 0.56
CD48P09326 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.55■□□□□ 0.56
CD48P09326 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC18.55■□□□□ 0.56
CD48P09326 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CD48P09326 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC18.54■□□□□ 0.56
CD48P09326 Z83836.1-201ENST00000624605 1642 ntBASIC18.54■□□□□ 0.56
CD48P09326 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.54■□□□□ 0.56
CD48P09326 AC002310.4-201ENST00000568114 377 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CD48P09326 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.54■□□□□ 0.56
CD48P09326 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
CD48P09326 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.54■□□□□ 0.56
CD48P09326 AC106820.2-201ENST00000563775 3264 ntBASIC18.54■□□□□ 0.56
CD48P09326 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms