Protein–RNA interactions for Protein: P08240

SRPRA, Signal recognition particle receptor subunit alpha, humanhuman

Known RBP Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRAP08240 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC18.05■□□□□ 0.48
SRPRAP08240 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPRAP08240 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.05■□□□□ 0.48
SRPRAP08240 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
SRPRAP08240 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 HLA-A-201ENST00000376802 1334 ntBASIC18.04■□□□□ 0.48
SRPRAP08240 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 MED29-202ENST00000594368 1471 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRPRAP08240 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC18.04■□□□□ 0.48
SRPRAP08240 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 AC103564.2-201ENST00000432853 1299 ntBASIC18.04■□□□□ 0.48
SRPRAP08240 PON3-205ENST00000451904 1053 ntTSL 3 BASIC18.04■□□□□ 0.48
SRPRAP08240 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 AC073648.2-201ENST00000510116 352 ntBASIC18.04■□□□□ 0.48
SRPRAP08240 MOK-208ENST00000519058 917 ntTSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 AP000867.4-201ENST00000641616 219 ntBASIC18.04■□□□□ 0.48
SRPRAP08240 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
SRPRAP08240 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
SRPRAP08240 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC18.04■□□□□ 0.48
SRPRAP08240 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC18.04■□□□□ 0.48
SRPRAP08240 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.04■□□□□ 0.48
SRPRAP08240 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
SRPRAP08240 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
SRPRAP08240 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.03■□□□□ 0.48
SRPRAP08240 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC18.03■□□□□ 0.48
SRPRAP08240 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.03■□□□□ 0.48
SRPRAP08240 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 AP001005.1-201ENST00000571755 1248 ntBASIC18.03■□□□□ 0.48
SRPRAP08240 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.03■□□□□ 0.48
SRPRAP08240 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
SRPRAP08240 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.03■□□□□ 0.48
SRPRAP08240 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
SRPRAP08240 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
SRPRAP08240 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
SRPRAP08240 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.02■□□□□ 0.48
SRPRAP08240 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
SRPRAP08240 AC018712.1-201ENST00000455767 687 ntBASIC18.02■□□□□ 0.48
SRPRAP08240 RNPS1P1-201ENST00000507437 918 ntBASIC18.02■□□□□ 0.48
SRPRAP08240 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC18.02■□□□□ 0.48
SRPRAP08240 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.02■□□□□ 0.48
SRPRAP08240 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC18.02■□□□□ 0.48
SRPRAP08240 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC18.02■□□□□ 0.48
SRPRAP08240 AL139288.1-201ENST00000623748 933 ntBASIC18.02■□□□□ 0.48
SRPRAP08240 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms