Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC16.5■□□□□ 0.23
THBS1P07996 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.5■□□□□ 0.23
THBS1P07996 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
THBS1P07996 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC16.5■□□□□ 0.23
THBS1P07996 NTF6B-201ENST00000591913 560 ntBASIC16.5■□□□□ 0.23
THBS1P07996 LITAF-220ENST00000620789 692 ntTSL 5 BASIC16.5■□□□□ 0.23
THBS1P07996 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
THBS1P07996 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
THBS1P07996 AL355312.1-201ENST00000407115 2176 ntBASIC16.5■□□□□ 0.23
THBS1P07996 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.49■□□□□ 0.23
THBS1P07996 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.49■□□□□ 0.23
THBS1P07996 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.49■□□□□ 0.23
THBS1P07996 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
THBS1P07996 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 PRICKLE4-202ENST00000394260 1035 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
THBS1P07996 PRICKLE4-203ENST00000394263 1155 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 AC117947.1-201ENST00000427448 529 ntBASIC16.49■□□□□ 0.23
THBS1P07996 HOMER2P1-201ENST00000455653 964 ntBASIC16.49■□□□□ 0.23
THBS1P07996 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
THBS1P07996 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC16.49■□□□□ 0.23
THBS1P07996 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
THBS1P07996 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.48■□□□□ 0.23
THBS1P07996 AL138688.1-201ENST00000624851 1594 ntBASIC16.48■□□□□ 0.23
THBS1P07996 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
THBS1P07996 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC16.48■□□□□ 0.23
THBS1P07996 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.48■□□□□ 0.23
THBS1P07996 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 AC004263.2-201ENST00000617183 678 ntBASIC16.48■□□□□ 0.23
THBS1P07996 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC16.48■□□□□ 0.23
THBS1P07996 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC16.48■□□□□ 0.23
THBS1P07996 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC16.48■□□□□ 0.23
THBS1P07996 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
THBS1P07996 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
THBS1P07996 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.48■□□□□ 0.23
THBS1P07996 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
THBS1P07996 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.48■□□□□ 0.23
THBS1P07996 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THBS1P07996 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
THBS1P07996 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.47■□□□□ 0.23
THBS1P07996 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THBS1P07996 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
THBS1P07996 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THBS1P07996 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.47■□□□□ 0.23
THBS1P07996 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.47■□□□□ 0.23
THBS1P07996 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.47■□□□□ 0.23
THBS1P07996 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.47■□□□□ 0.23
THBS1P07996 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
THBS1P07996 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms