Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.5■■□□□ 1.03
CHGBP05060 ARMC12-202ENST00000373866 1254 ntAPPRIS P1 TSL 3 BASIC21.5■■□□□ 1.03
CHGBP05060 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC21.5■■□□□ 1.03
CHGBP05060 AC007967.3-201ENST00000434308 558 ntBASIC21.5■■□□□ 1.03
CHGBP05060 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.5■■□□□ 1.03
CHGBP05060 MINOS1P3-201ENST00000457048 203 ntBASIC21.5■■□□□ 1.03
CHGBP05060 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC21.5■■□□□ 1.03
CHGBP05060 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC21.5■■□□□ 1.03
CHGBP05060 KRT18P31-201ENST00000506277 1292 ntBASIC21.5■■□□□ 1.03
CHGBP05060 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC21.5■■□□□ 1.03
CHGBP05060 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC21.5■■□□□ 1.03
CHGBP05060 IGHV3OR16-7-201ENST00000604106 360 ntBASIC21.5■■□□□ 1.03
CHGBP05060 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
CHGBP05060 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC21.5■■□□□ 1.03
CHGBP05060 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
CHGBP05060 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
CHGBP05060 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC21.49■■□□□ 1.03
CHGBP05060 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC21.49■■□□□ 1.03
CHGBP05060 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHGBP05060 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHGBP05060 CCDC78-201ENST00000293889 1611 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHGBP05060 AKR1C7P-201ENST00000305623 895 ntBASIC21.49■■□□□ 1.03
CHGBP05060 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC21.49■■□□□ 1.03
CHGBP05060 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC21.49■■□□□ 1.03
CHGBP05060 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 CBFB-203ENST00000561924 584 ntTSL 5 BASIC21.49■■□□□ 1.03
CHGBP05060 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
CHGBP05060 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHGBP05060 KRT18P55-202ENST00000578578 1546 ntBASIC21.49■■□□□ 1.03
CHGBP05060 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
CHGBP05060 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
CHGBP05060 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 TCTN1-229ENST00000614115 1965 ntTSL 5 BASIC21.48■■□□□ 1.03
CHGBP05060 GINS4-206ENST00000520710 2022 ntTSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC21.48■■□□□ 1.03
CHGBP05060 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC21.48■■□□□ 1.03
CHGBP05060 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC21.48■■□□□ 1.03
CHGBP05060 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC21.48■■□□□ 1.03
CHGBP05060 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC21.48■■□□□ 1.03
CHGBP05060 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC21.48■■□□□ 1.03
CHGBP05060 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
CHGBP05060 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.48■■□□□ 1.03
CHGBP05060 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC21.47■■□□□ 1.03
CHGBP05060 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 AL450487.1-201ENST00000426799 995 ntBASIC21.47■■□□□ 1.03
CHGBP05060 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC21.47■■□□□ 1.03
CHGBP05060 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC21.47■■□□□ 1.03
CHGBP05060 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.47■■□□□ 1.03
CHGBP05060 IFNL4P1-201ENST00000607083 540 ntBASIC21.47■■□□□ 1.03
CHGBP05060 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 ADM-208ENST00000534464 1640 ntTSL 2 BASIC21.47■■□□□ 1.03
CHGBP05060 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC21.47■■□□□ 1.03
CHGBP05060 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
CHGBP05060 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC21.46■■□□□ 1.03
CHGBP05060 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC21.46■■□□□ 1.03
CHGBP05060 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC21.46■■□□□ 1.03
CHGBP05060 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 18.3 ms