Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
CD74P04233 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC15.07■□□□□ 0
CD74P04233 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC15.07■□□□□ 0
CD74P04233 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 AP003097.1-201ENST00000530657 1135 ntBASIC15.07■□□□□ 0
CD74P04233 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC15.07■□□□□ 0
CD74P04233 SPI1-204ENST00000533968 1290 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC15.07■□□□□ 0
CD74P04233 AC124016.1-201ENST00000609552 612 ntBASIC15.07■□□□□ 0
CD74P04233 AC110285.5-201ENST00000611501 352 ntBASIC15.07■□□□□ 0
CD74P04233 MIR6786-201ENST00000616843 113 ntBASIC15.07■□□□□ 0
CD74P04233 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
CD74P04233 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.07■□□□□ 0
CD74P04233 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 REXO1L11P-201ENST00000620964 1927 ntBASIC15.07■□□□□ 0
CD74P04233 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC15.07■□□□□ 0
CD74P04233 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
CD74P04233 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 RBM6-210ENST00000442092 2260 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD74P04233 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 DOC2GP-204ENST00000639052 2548 ntBASIC15.06■□□□□ 0
CD74P04233 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CD74P04233 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 KRT18P23-201ENST00000435622 1283 ntBASIC15.06■□□□□ 0
CD74P04233 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC15.06■□□□□ 0
CD74P04233 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
CD74P04233 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 AC096733.2-201ENST00000609937 1394 ntBASIC15.06■□□□□ 0
CD74P04233 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
CD74P04233 INPP5J-213ENST00000620191 2306 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD74P04233 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
CD74P04233 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
CD74P04233 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
CD74P04233 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
CD74P04233 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC15.06■□□□□ 0
CD74P04233 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC15.06■□□□□ 0
CD74P04233 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD74P04233 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ 0
CD74P04233 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD74P04233 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
CD74P04233 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ 0
CD74P04233 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
CD74P04233 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC15.05■□□□□ 0
CD74P04233 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
CD74P04233 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC15.05■□□□□ 0
CD74P04233 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
CD74P04233 GAS7-202ENST00000396115 929 ntTSL 5 BASIC15.05■□□□□ -0
CD74P04233 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CD74P04233 AL353807.1-201ENST00000427475 662 ntBASIC15.05■□□□□ -0
CD74P04233 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
CD74P04233 FDX2-207ENST00000494368 584 ntTSL 4 BASIC15.05■□□□□ -0
CD74P04233 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC15.05■□□□□ -0
CD74P04233 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC15.05■□□□□ -0
CD74P04233 MIR3180-4-201ENST00000582223 153 ntBASIC15.05■□□□□ -0
CD74P04233 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC15.05■□□□□ -0
CD74P04233 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ -0
CD74P04233 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms