Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
SIX6O95475 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SIX6O95475 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.02■□□□□ -0
SIX6O95475 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.02■□□□□ -0
SIX6O95475 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SIX6O95475 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SIX6O95475 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SIX6O95475 KRT18P41-201ENST00000518924 1277 ntBASIC15.02■□□□□ -0
SIX6O95475 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SIX6O95475 RHOD-202ENST00000532559 538 ntTSL 3 BASIC15.02■□□□□ -0
SIX6O95475 WWOX-218ENST00000627394 894 ntTSL 5 BASIC15.02■□□□□ -0
SIX6O95475 AL603756.1-201ENST00000606511 2163 ntBASIC15.02□□□□□ -0.01
SIX6O95475 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SIX6O95475 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
SIX6O95475 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
SIX6O95475 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SIX6O95475 BTC-201ENST00000395743 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SIX6O95475 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SIX6O95475 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC15.02□□□□□ -0.01
SIX6O95475 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CLSTN1-201ENST00000361311 4647 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC15.01□□□□□ -0.01
SIX6O95475 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.01□□□□□ -0.01
SIX6O95475 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 POU5F1P3-201ENST00000428824 1078 ntBASIC15.01□□□□□ -0.01
SIX6O95475 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 AL121832.2-201ENST00000610979 668 ntBASIC15.01□□□□□ -0.01
SIX6O95475 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CGB7-202ENST00000596965 1949 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SIX6O95475 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CHTF8-203ENST00000448552 2903 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 CTCF-201ENST00000264010 3939 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC15.01□□□□□ -0.01
SIX6O95475 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
SIX6O95475 SLC18B1-201ENST00000275227 2368 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15□□□□□ -0.01
SIX6O95475 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15□□□□□ -0.01
SIX6O95475 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 MAGI1-202ENST00000402939 4389 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC15□□□□□ -0.01
SIX6O95475 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC15□□□□□ -0.01
SIX6O95475 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC15□□□□□ -0.01
SIX6O95475 AC060834.1-201ENST00000443027 2032 ntBASIC15□□□□□ -0.01
SIX6O95475 GCK-209ENST00000616242 2260 ntTSL 5 BASIC15□□□□□ -0.01
SIX6O95475 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC15□□□□□ -0.01
SIX6O95475 KRT8P11-201ENST00000409686 1436 ntBASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms