Protein–RNA interactions for Protein: O95398

RAPGEF3, Rap guanine nucleotide exchange factor 3, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3O95398 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF3O95398 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF3O95398 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF3O95398 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
RAPGEF3O95398 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 DYNLL1-201ENST00000242577 720 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 MRPL43-201ENST00000299179 747 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 TIMM8BP1-201ENST00000452384 211 ntBASIC26.63■■□□□ 1.85
RAPGEF3O95398 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 CXCL1P1-201ENST00000502804 216 ntBASIC26.63■■□□□ 1.85
RAPGEF3O95398 OVCA2-201ENST00000572195 1122 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 ME2-218ENST00000640965 2476 ntTSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 CBWD1-201ENST00000314367 1771 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC26.63■■□□□ 1.85
RAPGEF3O95398 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
RAPGEF3O95398 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 SRSF1-201ENST00000258962 1513 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 NABP1-203ENST00000409510 843 ntTSL 5 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CECR7-204ENST00000609932 568 ntTSL 2 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
RAPGEF3O95398 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
RAPGEF3O95398 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 CENPM-205ENST00000404067 905 ntTSL 3 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 RAC2-204ENST00000406508 893 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
RAPGEF3O95398 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 AL353135.1-201ENST00000606729 504 ntBASIC26.61■■□□□ 1.85
RAPGEF3O95398 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC26.61■■□□□ 1.85
RAPGEF3O95398 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 PTCHD3-202ENST00000622555 1720 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 MIR943-201ENST00000401286 94 ntBASIC26.6■■□□□ 1.85
RAPGEF3O95398 NAGK-205ENST00000443938 1221 ntAPPRIS ALT1 TSL 5 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 AC005606.1-201ENST00000567515 504 ntTSL 5 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 LINC02560-201ENST00000596379 459 ntBASIC26.6■■□□□ 1.85
RAPGEF3O95398 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 COBL-210ENST00000632460 1941 ntTSL 5 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 FZD8-201ENST00000374694 4030 ntAPPRIS P1 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC26.6■■□□□ 1.85
RAPGEF3O95398 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
RAPGEF3O95398 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC26.59■■□□□ 1.85
RAPGEF3O95398 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
RAPGEF3O95398 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC26.59■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms