Protein–RNA interactions for Protein: O75175

CNOT3, CCR4-NOT transcription complex subunit 3, humanhuman

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3O75175 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
CNOT3O75175 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
CNOT3O75175 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.39■□□□□ 0.38
CNOT3O75175 KRT8P50-201ENST00000562022 1438 ntBASIC17.39■□□□□ 0.38
CNOT3O75175 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
CNOT3O75175 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNOT3O75175 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 AP002383.4-201ENST00000442518 975 ntBASIC17.39■□□□□ 0.37
CNOT3O75175 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.39■□□□□ 0.37
CNOT3O75175 MIR3180-1-201ENST00000580374 94 ntBASIC17.39■□□□□ 0.37
CNOT3O75175 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC17.39■□□□□ 0.37
CNOT3O75175 MIR3180-3-201ENST00000584616 94 ntBASIC17.39■□□□□ 0.37
CNOT3O75175 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNOT3O75175 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
CNOT3O75175 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
CNOT3O75175 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
CNOT3O75175 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
CNOT3O75175 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT3O75175 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT3O75175 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC17.38■□□□□ 0.37
CNOT3O75175 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.38■□□□□ 0.37
CNOT3O75175 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT3O75175 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 TSSC2-201ENST00000450217 709 ntBASIC17.38■□□□□ 0.37
CNOT3O75175 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC17.38■□□□□ 0.37
CNOT3O75175 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
CNOT3O75175 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 SH3BP4-202ENST00000392011 5194 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.38■□□□□ 0.37
CNOT3O75175 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
CNOT3O75175 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNOT3O75175 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
CNOT3O75175 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNOT3O75175 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT3O75175 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.37■□□□□ 0.37
CNOT3O75175 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.37■□□□□ 0.37
CNOT3O75175 PVRIG2P-201ENST00000435460 978 ntBASIC17.37■□□□□ 0.37
CNOT3O75175 KRT126P-201ENST00000549467 1181 ntBASIC17.37■□□□□ 0.37
CNOT3O75175 NAA38-203ENST00000575071 553 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 AL121672.3-201ENST00000608644 468 ntBASIC17.37■□□□□ 0.37
CNOT3O75175 AC083906.6-201ENST00000641366 219 ntBASIC17.37■□□□□ 0.37
CNOT3O75175 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
CNOT3O75175 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC17.37■□□□□ 0.37
CNOT3O75175 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
CNOT3O75175 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms