Protein–RNA interactions for Protein: O60393

NOBOX, Homeobox protein NOBOX, humanhuman

Predictions only

Length 691 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NOBOXO60393 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 AL499627.1-201ENST00000569373 2188 ntBASIC17.75■□□□□ 0.43
NOBOXO60393 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NOBOXO60393 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC17.75■□□□□ 0.43
NOBOXO60393 BET1L-206ENST00000486280 665 ntTSL 3 BASIC17.75■□□□□ 0.43
NOBOXO60393 AC113404.2-201ENST00000507884 177 ntBASIC17.75■□□□□ 0.43
NOBOXO60393 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC17.75■□□□□ 0.43
NOBOXO60393 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC17.75■□□□□ 0.43
NOBOXO60393 ASL-204ENST00000395331 1538 ntTSL 5 BASIC17.75■□□□□ 0.43
NOBOXO60393 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
NOBOXO60393 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC17.75■□□□□ 0.43
NOBOXO60393 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
NOBOXO60393 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
NOBOXO60393 MADD-208ENST00000405573 1823 ntTSL 5 BASIC17.75■□□□□ 0.43
NOBOXO60393 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.74■□□□□ 0.43
NOBOXO60393 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC17.74■□□□□ 0.43
NOBOXO60393 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC17.74■□□□□ 0.43
NOBOXO60393 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
NOBOXO60393 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 NSUN5P1-202ENST00000421140 1535 ntBASIC17.74■□□□□ 0.43
NOBOXO60393 NSUN5P2-203ENST00000457352 1529 ntBASIC17.74■□□□□ 0.43
NOBOXO60393 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC17.74■□□□□ 0.43
NOBOXO60393 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
NOBOXO60393 AC009078.2-202ENST00000463353 338 ntBASIC17.74■□□□□ 0.43
NOBOXO60393 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
NOBOXO60393 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.74■□□□□ 0.43
NOBOXO60393 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC17.74■□□□□ 0.43
NOBOXO60393 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 GXYLT1P4-201ENST00000613576 1192 ntBASIC17.74■□□□□ 0.43
NOBOXO60393 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.74■□□□□ 0.43
NOBOXO60393 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
NOBOXO60393 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
NOBOXO60393 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 AL024508.2-201ENST00000607749 1894 ntBASIC17.73■□□□□ 0.43
NOBOXO60393 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NOBOXO60393 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC17.73■□□□□ 0.43
NOBOXO60393 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 VENTXP7-201ENST00000475503 772 ntBASIC17.73■□□□□ 0.43
NOBOXO60393 CDV3-207ENST00000508481 661 ntTSL 3 BASIC17.73■□□□□ 0.43
NOBOXO60393 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC17.73■□□□□ 0.43
NOBOXO60393 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 ABR-204ENST00000543210 1049 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 ABR-217ENST00000572441 563 ntTSL 4 BASIC17.73■□□□□ 0.43
NOBOXO60393 AC104692.2-201ENST00000603054 253 ntBASIC17.73■□□□□ 0.43
NOBOXO60393 AL353801.3-201ENST00000609898 542 ntBASIC17.73■□□□□ 0.43
NOBOXO60393 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.73■□□□□ 0.43
NOBOXO60393 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
NOBOXO60393 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.73■□□□□ 0.43
NOBOXO60393 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
NOBOXO60393 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms