Protein–RNA interactions for Protein: O43567

RNF13, E3 ubiquitin-protein ligase RNF13, humanhuman

Predictions only

Length 381 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF13O43567 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF13O43567 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF13O43567 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
RNF13O43567 TMEM59L-201ENST00000262817 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
RNF13O43567 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.33■□□□□ 0.21
RNF13O43567 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.33■□□□□ 0.21
RNF13O43567 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF13O43567 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
RNF13O43567 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF13O43567 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC16.33■□□□□ 0.21
RNF13O43567 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
RNF13O43567 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
RNF13O43567 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
RNF13O43567 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 AC140113.3-201ENST00000605663 199 ntBASIC16.33■□□□□ 0.2
RNF13O43567 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.33■□□□□ 0.2
RNF13O43567 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
RNF13O43567 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC16.33■□□□□ 0.2
RNF13O43567 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
RNF13O43567 STXBP3-201ENST00000370008 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
RNF13O43567 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF13O43567 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
RNF13O43567 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 KIRREL3-AS3-201ENST00000404882 831 ntBASIC16.32■□□□□ 0.2
RNF13O43567 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 SP100-208ENST00000427101 1922 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 AC093010.1-201ENST00000473625 1624 ntBASIC16.32■□□□□ 0.2
RNF13O43567 RPS20-210ENST00000523936 899 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC16.32■□□□□ 0.2
RNF13O43567 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 AL138966.2-201ENST00000621997 464 ntBASIC16.32■□□□□ 0.2
RNF13O43567 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 AC080080.1-201ENST00000625121 2420 ntBASIC16.32■□□□□ 0.2
RNF13O43567 AL157888.1-201ENST00000631930 593 ntBASIC16.32■□□□□ 0.2
RNF13O43567 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC16.32■□□□□ 0.2
RNF13O43567 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
RNF13O43567 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC16.32■□□□□ 0.2
RNF13O43567 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 PML-220ENST00000569477 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 AC108860.2-201ENST00000562760 2183 ntBASIC16.31■□□□□ 0.2
RNF13O43567 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC16.31■□□□□ 0.2
RNF13O43567 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 PBK-203ENST00000522944 1499 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
RNF13O43567 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF13O43567 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
RNF13O43567 NDUFAF2-201ENST00000296597 719 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF13O43567 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC16.31■□□□□ 0.2
RNF13O43567 AC034232.1-201ENST00000506026 1064 ntBASIC16.31■□□□□ 0.2
RNF13O43567 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
RNF13O43567 AC008687.5-201ENST00000593746 558 ntBASIC16.31■□□□□ 0.2
RNF13O43567 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC16.31■□□□□ 0.2
RNF13O43567 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC16.31■□□□□ 0.2
RNF13O43567 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
RNF13O43567 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms